Gene Avin_18930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_18930 
SymbolrlmL 
ID7760827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1881404 
End bp1883620 
Gene Length2217 bp 
Protein Length738 aa 
Translation table11 
GC content69% 
IMG OID643804791 
Product23S rRNA m(2)G2445 methyltransferase 
Protein accessionYP_002799080 
Protein GI226944007 
COG category[L] Replication, recombination and repair 
COG ID[COG0116] Predicted N6-adenine-specific DNA methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGATC GTTACGAACT CGTTCTCACC TGCCCGAAGA GCCTGGAAGG CCTGCTCGCC 
GAGGAGGCGG TCGGCCTGGG CCTGGCCGAG GTCCGCGAGC AGGTCGCCGG GGTGCGGGGC
CTGGGCGACC TGGAAACCGC CTACCGGCTG TGCCTCTGGT CGCGTCTGGC CAACCGCGTG
CTGCTGGTGC TCGGACGCTT TCCGGTGGGC AGTCCCGACG AACTGTACCA GGGCGTGCAG
ACGCTCGACT GGCAGGATCA CCTGCTGCCG AGCGGCAGCC TGGCGGTGGA GTTCAACGGT
CATGGCTCGG GCATCGACAA CAGCCATTTC GGTGCGCTCA AGGTCAAGGA CGCCATCGTC
GATCAGTTGC GCCGGCACAG CGGCCAGCGC CCTTCGGTGG ACAAGCTCAA CCCGGATCTG
CGTATCCACC TGCGCCTGGA GCGGGGCGAG GCGGTACTGT CCCTCGATCT TTCCGGCTAT
AGCCTGCACC AGCGCGGCTA CCGCCTGCAG CAGGGGGTAG CGCCGCTCAA GGAAAACCTC
GCCGCGGCCA TCCTGATCCG TGCCGGCTGG CCGCGTATCG CCGCCGCGGG GGGCGCGCTG
GTCGACCCCA TGTGCGGGGT CGGCACCTTC CTGGTCGAGG CGGGAATGAT GGCCGCCGAC
CTCGCGCCCA ACCTGCGGCG CGAGCGCTGG GGCTTCGGCA ACTGGCTGGG ACATGTCCCG
GCGCTGTGGA AGAAGCTGCA TGCCGAGGCC GAGGAGCGCG CCGCCGCGGG GCTGGCCCGG
CCGCCCCTGT GGATTCGCGG TTACGAGGCC GATCCCCGGC TGATCCAGCC GGCGCGCAAC
AACATCGAGC GCGCCGGGCT GGACGGCTGG ATCCGGGTCT ACCAGGGCGA ACTGGCCACC
TTCGAGCCGC ACCCGGACCG TGGCCAGACC GGCCTGGTGG TATGCAACCC GCCCTACGGC
GAGCGCCTGG GCGATCCGGC CAGCCTGCTC TATCTCTACC AGCATCTCGG CGAGCGCCTG
CGCAGCCGTT GCGAGGGCTG GGAGGCGGCG GTGTTCACCG GGGCGCCGGA GCTGGGCAGA
CGCATGGGCA TCCGCAGCCA CAAGCAGTAC GCCTTCTGGA ACGGCGCGCT GCCGTGCAAG
CTGCTGCTGT TCAGGGTGGT GCCGGAGCAG TTCGTCACCG ACCGCAGCGA GCCGGCGCCG
GGCGATGCGC GGATGATCGG CGGGCAACTG GTGGAGCGGC CGCCGGCGGT GCGCAGCGCG
CCGGCGCGGC TCTCCGAGGG CGGGCGGATG TTCGCCAACC GCCTGCAGAA GAACATCAGG
AGCCTGGGCA AGTGGGCGCG CCGCGAAGGC ATCGAGTGCT ACCGGCTGTA CGACGCCGAC
ATGCCGGAAT ACGCCCTGGC GGTGGACCTG TACCGCGACT GGGTGCATGT GCAGGAGTAC
GCGCCGCCGC GCTCGGTCGA TCCGGAAAAG GCCCAGGTGC GTCTGCTCGA CGCCCTGGCG
GCGATTCCCC AGGCGCTGGA CATCGATCCG GCGCGCGTGG TGATCAAGCG TCGCGAGCGC
CAGGCCGGCA GCAGGCAGTA CGAGCGCCAG GACCAGCAGG GGCGTTTCAT GGAGGTCGGC
GAGGGTGGCG TGAAGCTCCT GGTCAATCTC ACCGACTACC TGGATACCGG GCTGTTCCTC
GATCATCGTC CGCTGCGCCT GCGCATCCAG CGCGAGGCGG CCGGCAAGCG CTTCCTCAAC
CTGTTCTGCT ACACGGCGAC GGCCACCGTG CACGCGGCCA AGGGCGGCGC GCGCAGCACC
ACCAGCGTCG ATCTGTCGAA GACCTATCTC GACTGGGCGC GGCGCAACTT GGCGCTGAAC
GGCTTCTCCG AGAAGCACCG TCTGGAGCAG GCCGACGTGA TGGACTGGCT GGCCGCCGAC
CGCGGCGAGT ACGAACTGAT CTTCATCGAC CCGCCGACCT TCTCCAACTC CAAGCGCATG
GAGGGGGTGT TCGACGTGCA GCGCGATCAC GCGCGCCTGC TCGACCTGGC CCTGGCCCGC
CTGGCCAGGG GTGGGGTGCT GTATTTCTCC AACAACTTCC GCAAGTTCCA GCTCGATCCG
CTGCTCGCAC AGCGCTATGC GCTGGAGGAG ATCAGCGCGC AGACCCTGGA CCCGGATTTC
GTCCGCAACC CGAAGATCCA CCGGGCTTGG CGGCTGCAGG CGAAACAGCG GGACTGA
 
Protein sequence
MSDRYELVLT CPKSLEGLLA EEAVGLGLAE VREQVAGVRG LGDLETAYRL CLWSRLANRV 
LLVLGRFPVG SPDELYQGVQ TLDWQDHLLP SGSLAVEFNG HGSGIDNSHF GALKVKDAIV
DQLRRHSGQR PSVDKLNPDL RIHLRLERGE AVLSLDLSGY SLHQRGYRLQ QGVAPLKENL
AAAILIRAGW PRIAAAGGAL VDPMCGVGTF LVEAGMMAAD LAPNLRRERW GFGNWLGHVP
ALWKKLHAEA EERAAAGLAR PPLWIRGYEA DPRLIQPARN NIERAGLDGW IRVYQGELAT
FEPHPDRGQT GLVVCNPPYG ERLGDPASLL YLYQHLGERL RSRCEGWEAA VFTGAPELGR
RMGIRSHKQY AFWNGALPCK LLLFRVVPEQ FVTDRSEPAP GDARMIGGQL VERPPAVRSA
PARLSEGGRM FANRLQKNIR SLGKWARREG IECYRLYDAD MPEYALAVDL YRDWVHVQEY
APPRSVDPEK AQVRLLDALA AIPQALDIDP ARVVIKRRER QAGSRQYERQ DQQGRFMEVG
EGGVKLLVNL TDYLDTGLFL DHRPLRLRIQ REAAGKRFLN LFCYTATATV HAAKGGARST
TSVDLSKTYL DWARRNLALN GFSEKHRLEQ ADVMDWLAAD RGEYELIFID PPTFSNSKRM
EGVFDVQRDH ARLLDLALAR LARGGVLYFS NNFRKFQLDP LLAQRYALEE ISAQTLDPDF
VRNPKIHRAW RLQAKQRD