| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_18680 |
|---|
| Symbol | |
|---|
| ID | 7760802 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 1849813 |
|---|
| End bp | 1850769 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643804766 |
|---|
| Product | ABC transporter, inner membrane permease component |
|---|
| Protein accession | YP_002799055 |
|---|
| Protein GI | 226943982 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.158207 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGCT ACCTGATCGG CCGCGTCGGC CAGGCCCTGC TGGTGCTCTG GGGGGCCTAC
AGCATCGCCT ACGCCATCCT TTATCTGCTG CCCGCCGATA CCCTGGCAAT CATGCTCAGC
GCCTCGGGAC TGGAGATCGA CTCGCTGCCC GAGGAGGAGA TCGCCCGTGC GCGCGCCTAC
TATGGGCTGG ACCGGAGCTT CCTGGAGCAG TATTTCGACC TGTTGTGGGG CGCCCTGCAG
GGCGACCTCG GCCAGTCGCT GACGCAGAAC CGCCCGGTCG CCGAACTGCT CGCCGAACGC
CTGCCGCAGA CCCTGTCGCT GGCCGGGTTG GCGATACTGC TGTCGCTGGC CGGCGGCATC
GGTCTGGCCT ACCTGACCGC CTACGTGCGT TGGCAGCCCC TGAAGGCGGC GCTGGCCCGC
CTGCCTTCGC TGGGCTTCTC GATCCCGGTG TTCTGGATGG GCCTGCTGCT GATCCAGGTG
TTCGCCTTCG GCCTCGGCTG GTTCCCGGCC ACCGGCAACG CGGGTTTCGA AAGCCTGGTG
CTGCCGGCGG TGACCCTGGC GATCCCCAGC GCGGCGGTCT ACGCCCAGGT GCTGCAGCGC
GGCTTCCAGT GCGTGTGGCG CGAGCCCTAT ATCGTCACCG CCTACGCCAA GGGGCTCAGC
CATGGCCAGG TACAGGCGCG CCATGCCTTC AAGAACGCTG CGCTGCCGCT GCTCACCCTG
ATCGGCCTGC AGGTGGGCAA CACAGTGTCC GGCGCGGTGC TGGTGGAGAC CATCTTCACC
CGCTCCGGGG TCGGCCGGCT GGTCCAGGAA GCCGTGCTGC GCCAGGACAT CCCGGTGGTG
CTGGCGGTGG TCGCGGTGTC CGCGGCGGCT TTCGTCGCGG TCAACCTGAT CGTCGACCTG
CTCTATCCCA CCCTCGACCC GCGCATCGCC CATATGCCCG AGGTGTCACA GCCATGA
|
|---|
| Protein sequence | MSRYLIGRVG QALLVLWGAY SIAYAILYLL PADTLAIMLS ASGLEIDSLP EEEIARARAY
YGLDRSFLEQ YFDLLWGALQ GDLGQSLTQN RPVAELLAER LPQTLSLAGL AILLSLAGGI
GLAYLTAYVR WQPLKAALAR LPSLGFSIPV FWMGLLLIQV FAFGLGWFPA TGNAGFESLV
LPAVTLAIPS AAVYAQVLQR GFQCVWREPY IVTAYAKGLS HGQVQARHAF KNAALPLLTL
IGLQVGNTVS GAVLVETIFT RSGVGRLVQE AVLRQDIPVV LAVVAVSAAA FVAVNLIVDL
LYPTLDPRIA HMPEVSQP
|
|---|
| |