Gene Avin_18190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_18190 
Symbol 
ID7760754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1804045 
End bp1804743 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content65% 
IMG OID643804718 
Producthypothetical protein 
Protein accessionYP_002799007 
Protein GI226943934 
COG category[S] Function unknown 
COG ID[COG0217] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01033] DNA-binding regulatory protein, YebC/PmpR family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGCCC AGTGGAAAGC CAGACCCAAG GAAATTGCCG CCAATGCCAA GGGCAAGATC 
TTCGGCAAGC TGGTCAAGGA AATCATGATT GCCGCACGCA ACGGTGCGGA CCCGGACATG
AACCCCAAGC TGCGCCTGGC GGTGTATCAG GCGAAGAAGG CCTCGATGCC CAAGGACACC
CTGGAGCGCG CCATCAAGAA AGGCGCGGGA CTCTCCGGCG AGGTGGTCAA CTACGAGCGC
ACGCTCTACG AGGGCTTCGC CCCGCACCGC GTGCCGGTGA TCGTCGAGTG CCTGACCGAC
AACATCAATC GCACCGTGGC GGAAATCCGC GTGCTGTTCC GCAAGGGCCA ACTCGGCACT
TCCGGCTCGG TGAGCTGGGA CTTCGACCAC CTGGGCATGA TCGAGGCCGC CGCCGAGAAC
GGCGCCGATC CGGAACTGGC CGCCATCGAG GCCGGCGCCC AGGACTTCGA GCCAGCCGAG
GAAGGCGCCA CCCTGTTCTA CACCGATCCG ACCGACCTGG ACGCGGTGTG CAAGGCGCTG
CCGGAGTTCG GCTTCACCGT GCAGTCGGCC AACCTCGGCT ACAAGGCGAA GAACCCGGTG
AGCCTGTCGG GCAGCGAACT CGAGGAGGTC GAGGCCTTCC TCGAAGCCCT CGACAACCAT
GACGACGTGC AGAACGTCTA CGTCGGACTG AGCGTCTGA
 
Protein sequence
MGAQWKARPK EIAANAKGKI FGKLVKEIMI AARNGADPDM NPKLRLAVYQ AKKASMPKDT 
LERAIKKGAG LSGEVVNYER TLYEGFAPHR VPVIVECLTD NINRTVAEIR VLFRKGQLGT
SGSVSWDFDH LGMIEAAAEN GADPELAAIE AGAQDFEPAE EGATLFYTDP TDLDAVCKAL
PEFGFTVQSA NLGYKAKNPV SLSGSELEEV EAFLEALDNH DDVQNVYVGL SV