Gene Avin_17600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_17600 
Symbol 
ID7760695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1743201 
End bp1744592 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content69% 
IMG OID643804659 
Productmembrane protein, D-beta-hydroxybutyrate permease 
Protein accessionYP_002798948 
Protein GI226943875 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism 
COG ID[COG2610] H+/gluconate symporter and related permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGTCA TCGTCGCCCT CGCCGCCCTG GCCCTGCTCA TGCTGGCGGC CTACCGCGGC 
TACAGCGTGA TCCTCTTCGC CCCCATCGCC GCCCTCGGCG CCGTGTTGCT GACCGACCCC
GGCGCGGTGG CGCCGGCCTT CAGCGGAGTG TTCATGGAAA AGATGGTCGG CTTCATCAAG
CTGTACTTCC CGGTGTTCCT GCTCGGCGCC GTGTTCGGCA AGCTGATCGA GCTGTCCGGT
TTCTCCCGCT CCATCGTCAG CGCGGCGATC CGCCTGTTCG GCACCCGCCA GGCCATGCGG
GTCATCGTGC TGGTCTGCGC CCTGCTGACC TACGGCGGGG TGTCGCTGTT CGTGGTGGTG
TTCGCGGTCT ATCCGTTCGC CGCCGAGATG TTCCGCCAGA GCGACATCCC CAAGCGGTTG
ATCCCGGCGA CCATCGCCCT CGGCGCCTTC AGCTTCACCA TGGACGCGCT GCCCGGCACG
CCGCAGATCC AGAACATCAT CCCCAGCGCC TTCTTCGGCA CCAACGCCTG GGCCGCGCCC
TGGCTGGGGC TGATCGGCGC GCTGTTCGTG CTCGCGGCCG GCCTGCTCTA CCTGCAGCGC
CAGTTGCGCA AGGCCCGCGC CGCCGGCGAG GGCTACGGCA GCGACCTGCG CAACGAGCCG
GAGACCGCCG CGGACCTGGT GCTGCCCAAC CCCTGGCTGG CGCTCTCCCC GCTCCTGCTG
GTGGGCGTCG CCAACCTGTT CTTCACCCAC CTGATCCCCG CGCTCTACGG CAAGACCTAC
AGCCTGCAAC TGGCCGGCAT GGCCGCGCCG GTGCAGACCG ACATCGGCAG GATCACCGCC
ATCTGGGCGG TGGAGGCGGC GCTGCTGCTG GGCATCCTGC TGGTGCTGGT CAGCAGCTTC
GGCGCGGTGC GCGACCGGCT GGCCGAGGGC AGCAAGACCG CCGTCGGCGG CTCGCTGCTG
GCGGCGATGA ACACCGCCTC GGAATACGGC TTCGGCGCGG TGATCGCCGC GCTGCCGGGT
TTCCTGGTGC TGGCCGACGC ACTGAAGAGC ATTCCCGACC CGCTGCTCAA CGAGGCGGTC
ACCGTCACCC TGCTGGCCGG CATCACCGGC TCCGCGTCGG GCGGCATGAG CATCGCCCTG
GCGGCCATGT CGGAAACCTT CATCGCCGCC GCCCACGCCG CGCAGATCCC CCTGGAAGTG
CTGCACCGGG TCGCCGCCAT GGCCAGCGGC GGCATGGACA CCCTGCCGCA CAACGGCGCG
GTGATCACCC TGCTGGCGGT CACCGGCCTG ACCCACCGGG AAGCCTACAA GGACATCTTC
GGCATCACCC TGATCAAGAC CCTGGCGGTA TTCGTGGTGA TCGCCACCTT CTACCTCACC
GGCCTGGTCT GA
 
Protein sequence
MSVIVALAAL ALLMLAAYRG YSVILFAPIA ALGAVLLTDP GAVAPAFSGV FMEKMVGFIK 
LYFPVFLLGA VFGKLIELSG FSRSIVSAAI RLFGTRQAMR VIVLVCALLT YGGVSLFVVV
FAVYPFAAEM FRQSDIPKRL IPATIALGAF SFTMDALPGT PQIQNIIPSA FFGTNAWAAP
WLGLIGALFV LAAGLLYLQR QLRKARAAGE GYGSDLRNEP ETAADLVLPN PWLALSPLLL
VGVANLFFTH LIPALYGKTY SLQLAGMAAP VQTDIGRITA IWAVEAALLL GILLVLVSSF
GAVRDRLAEG SKTAVGGSLL AAMNTASEYG FGAVIAALPG FLVLADALKS IPDPLLNEAV
TVTLLAGITG SASGGMSIAL AAMSETFIAA AHAAQIPLEV LHRVAAMASG GMDTLPHNGA
VITLLAVTGL THREAYKDIF GITLIKTLAV FVVIATFYLT GLV