Gene Avin_17540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_17540 
Symbol 
ID7760689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1738917 
End bp1739591 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content62% 
IMG OID643804653 
Producttranscriptional regulator, GntR family 
Protein accessionYP_002798942 
Protein GI226943869 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.615531 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTCCC ACGATGCCAT CGCGCTGCTG CGCACGCAGT CCCTGACGAA CCTGGTCCAT 
GAGGAGTTGG AACAGCGAAT CGCTACCGGG CAGCTTCTTC CCGGAGCACC GCTGCGCGAA
GCCGCGATCG CGACGGACAT GGGCATTTCC CGTGGGCCGG TTCGCGAAGC GTTCCGCATG
CTGGAGGAGC GCGGGCTGGT CATGTTCGAG AAGAACTGCG GCGTTCGCGT TCGCCAGCTC
GATCTGCAGC AGGCCACGCA GATTTATCAG GTGCGGATTC CGCTGGAAGG CCTGATCGGC
GAACTGGTGA CGCGGACGCT GACTTCAGAA GCCGGGGAGC AGGTCCGGCA AGTGCTGGAC
CAGATGGCCG AGAAAGTCGC TCATCAGGAT GTTCCCGCCT ACACCGAGCT GAACTTCCGT
TTTCATGACC TGCTTGCCAG GTTCACGGGA AACGCGGCTC TTTACGACAC ATACCGGCGC
CTGGTAGTGC AGCTCAAGCT GTTCAGGAGC TATACCTTCC GGCACGACCC CGAGACGATC
GGCATATCGC TCCAGGAACA CAACGCGATT TTCGAGGCGA TAACTTCCCC GGACACCTCC
CTGGCGGGAG AACTTTTACG CCGGCACGCG GAGGATAGTC TGACCCGCCT GTGCGCGGCC
TCCGGATCCG CATGA
 
Protein sequence
MSSHDAIALL RTQSLTNLVH EELEQRIATG QLLPGAPLRE AAIATDMGIS RGPVREAFRM 
LEERGLVMFE KNCGVRVRQL DLQQATQIYQ VRIPLEGLIG ELVTRTLTSE AGEQVRQVLD
QMAEKVAHQD VPAYTELNFR FHDLLARFTG NAALYDTYRR LVVQLKLFRS YTFRHDPETI
GISLQEHNAI FEAITSPDTS LAGELLRRHA EDSLTRLCAA SGSA