Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_17540 |
Symbol | |
ID | 7760689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 1738917 |
End bp | 1739591 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643804653 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_002798942 |
Protein GI | 226943869 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.615531 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTCCC ACGATGCCAT CGCGCTGCTG CGCACGCAGT CCCTGACGAA CCTGGTCCAT GAGGAGTTGG AACAGCGAAT CGCTACCGGG CAGCTTCTTC CCGGAGCACC GCTGCGCGAA GCCGCGATCG CGACGGACAT GGGCATTTCC CGTGGGCCGG TTCGCGAAGC GTTCCGCATG CTGGAGGAGC GCGGGCTGGT CATGTTCGAG AAGAACTGCG GCGTTCGCGT TCGCCAGCTC GATCTGCAGC AGGCCACGCA GATTTATCAG GTGCGGATTC CGCTGGAAGG CCTGATCGGC GAACTGGTGA CGCGGACGCT GACTTCAGAA GCCGGGGAGC AGGTCCGGCA AGTGCTGGAC CAGATGGCCG AGAAAGTCGC TCATCAGGAT GTTCCCGCCT ACACCGAGCT GAACTTCCGT TTTCATGACC TGCTTGCCAG GTTCACGGGA AACGCGGCTC TTTACGACAC ATACCGGCGC CTGGTAGTGC AGCTCAAGCT GTTCAGGAGC TATACCTTCC GGCACGACCC CGAGACGATC GGCATATCGC TCCAGGAACA CAACGCGATT TTCGAGGCGA TAACTTCCCC GGACACCTCC CTGGCGGGAG AACTTTTACG CCGGCACGCG GAGGATAGTC TGACCCGCCT GTGCGCGGCC TCCGGATCCG CATGA
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Protein sequence | MSSHDAIALL RTQSLTNLVH EELEQRIATG QLLPGAPLRE AAIATDMGIS RGPVREAFRM LEERGLVMFE KNCGVRVRQL DLQQATQIYQ VRIPLEGLIG ELVTRTLTSE AGEQVRQVLD QMAEKVAHQD VPAYTELNFR FHDLLARFTG NAALYDTYRR LVVQLKLFRS YTFRHDPETI GISLQEHNAI FEAITSPDTS LAGELLRRHA EDSLTRLCAA SGSA
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