| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_17480 |
|---|
| Symbol | |
|---|
| ID | 7760683 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 1733542 |
|---|
| End bp | 1734363 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643804647 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002798936 |
|---|
| Protein GI | 226943863 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3336] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.870932 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACACG CCGCCGTCCA TGCCCCGGCC CACGCCGACA GTGTCCCGGC CCTGCTCTTC
CCCGCCCTGC TGCTCGGCCT CTATGCGTTT GCCGCCCTGC GCCCAAGACG CGCCGGACGG
CGCTGGAGCC CCTGGCGCAC GCTGAGCTTC GCCCTCGGTA CCGCCCTGCT CGGCCTGGCC
CTGGCGCCGC CCGTGGTCGC CTTCGCCCAG GCCGACCTGC GCGGGCATAT GCTCCAGCAC
CTGCTGCTGG GCATGTTCGT CCCCCTCGGC CTGGTCCTGG GCGCACCCGG CACGCTACTG
CTGCGCACTC TGCCGATACG GGCGACGCGT ATCCTACTGG CCTTCCTGGA TAGCCGTCCG
CTGCGGACGC TGATCCATCC GCTCACCGCG CTGGTGCTGG ATATCGGCGG CATGTACCTG
CTCTACCTGA CGCCCTTGTT CGTCCTCAGC GCCCACGATC CGCTCGTGCA CTTCCTGGTG
CACCTGCATT TCCTGCTGTC CGGCTACCTG TTCACCTGGG CCATCGCCGG CCCCGATCCC
ACGCCGCACC GTCCCGGCCC GTGGCTACGC CTCGGCGTGC TGTTTCTCGG CACGGCCCTG
CATGCGACGC TCGGCAAGCT CATGTACGCC TATGGTTTCC CGCGGGGCAC GGCGCATCCC
CCGAGCGAGA TACGGGCCGC GGCGCAGCTC ATGTATTACG GCGGGGACGT GGCGGAACTG
CTGCTGGCGA TCGCCCTCTT CACGCTCTGG TTCCGCCGGG TACCGACGCG CGCTTTCCCA
GGGCGCATCG ACGATCGGCA TGCGCTGCCC GGCAGCGATT AG
|
|---|
| Protein sequence | MEHAAVHAPA HADSVPALLF PALLLGLYAF AALRPRRAGR RWSPWRTLSF ALGTALLGLA
LAPPVVAFAQ ADLRGHMLQH LLLGMFVPLG LVLGAPGTLL LRTLPIRATR ILLAFLDSRP
LRTLIHPLTA LVLDIGGMYL LYLTPLFVLS AHDPLVHFLV HLHFLLSGYL FTWAIAGPDP
TPHRPGPWLR LGVLFLGTAL HATLGKLMYA YGFPRGTAHP PSEIRAAAQL MYYGGDVAEL
LLAIALFTLW FRRVPTRAFP GRIDDRHALP GSD
|
|---|
| |