| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_16840 |
|---|
| Symbol | |
|---|
| ID | 7760619 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 1672985 |
|---|
| End bp | 1674007 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643804583 |
|---|
| Product | FabD/lysophospholipase-like protein |
|---|
| Protein accession | YP_002798873 |
|---|
| Protein GI | 226943800 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0025923 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCTTTC GTTCGCGCGA CAAGCGTTCG ACCCTGAGCC TTGCTCTGCA GGGCGGCGGC
GCCCATGGCG CCTTCACCTG GGGCGTGCTG GATGCGCTAC TGGAGGACGG CCGGCTCGAC
TTCACGGGCA TCAGCGGCAC CAGTGCCGGC GCGATGAACG CGACCATGCT GGCCCATGGC
CTGCTGCAAG GCGGTCGCGA CGGCGCGCGG GAGGCGCTGG CCAGCTTCTG GCAGGCGGTG
GCCAGCAGCG CTCCGCTACT CAATGCCGGC GCCAACATCC GCAGCGGCCA TCCGGCGACC
GGCCTCAAGC TGATGCTCTA CTGGGCCCAG ATGCTGTCGC CGCGCCAGCT CAATCCGCTG
AACGTCAATC CATTGCGCGA CATCCTCGCC TCGCTGGTCG ATTTCGAGCG TCTGCGCACG
GATTGCCCGC TCAAGCTGTT CATCGCCGCG ACCAATGCCA ACACCGGCCG CCTGCGGCTG
TTCCGCAGCC ACGAGCTGAG CGTGGACTGC GTGCTGGCCT CGGCCTGCCT GCCGACCTTC
CACCATACCG TGGAAATCGA CGGCGAACCC TACTGGGACG GCGCCTTCTC GGCGAATCCG
GCGGTGTTTC CGCTGGTCTA CGAATGCGAT GCGAGCGACA TCCTGCTCGT CCTGCTCAGT
CCCATGAGCC ATGGCAAGAC GCCGCGGAGT GCCGAGGAGA TCCGCCGCCG CGCGCAGGAA
CTGGCGTTCA AGTCCACCTT CCTGCGCGAG ATGCACAGCC TCGCCCAGGC CCGTACGCAC
GCAGCCCGCA CGGTGCTACC CCTGAACAGG CTGGAACGGC GGTTGACCCG GACCCACCTG
CACATGATCG CCGACGACGC GCTGATGAGC CGGCTCGCCG CGGAATCGAA GATGACCACC
AGCCAGCCCT TTCTGGAAAT GCTCCGCGAC CAGGGCCGCT CACGGGCCCA TGACTGGCTC
GAAAGCCATT ACCGGGCAAT CGGCAGGCGC TCCTCGGTGG ATATCGCCAC CGTATTCCTC
TGA
|
|---|
| Protein sequence | MFFRSRDKRS TLSLALQGGG AHGAFTWGVL DALLEDGRLD FTGISGTSAG AMNATMLAHG
LLQGGRDGAR EALASFWQAV ASSAPLLNAG ANIRSGHPAT GLKLMLYWAQ MLSPRQLNPL
NVNPLRDILA SLVDFERLRT DCPLKLFIAA TNANTGRLRL FRSHELSVDC VLASACLPTF
HHTVEIDGEP YWDGAFSANP AVFPLVYECD ASDILLVLLS PMSHGKTPRS AEEIRRRAQE
LAFKSTFLRE MHSLAQARTH AARTVLPLNR LERRLTRTHL HMIADDALMS RLAAESKMTT
SQPFLEMLRD QGRSRAHDWL ESHYRAIGRR SSVDIATVFL
|
|---|
| |