| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_16770 |
|---|
| Symbol | |
|---|
| ID | 7760611 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 1662111 |
|---|
| End bp | 1663229 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643804575 |
|---|
| Product | ABC-2 type transporter, permease component |
|---|
| Protein accession | YP_002798865 |
|---|
| Protein GI | 226943792 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00841824 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAAGC TCTCCAACAT CCTGCAACTC GGACTCAAGG AACTGCGCAG CCTGTACCGC
GACCGGACCA TGCTGGCGCT GATCGTCTAC TCCTTCAGCC TGGCCATCTA TTCCAGCGCC
ACCGGCGTGC CGGAATCGCC CTACCGCGCC ACCGTCGCCG TGATCGACGA GGACCGCTCG
CAGGTCTCCG CGCGGATTCT CGACGCCTTC CAGATGCCCT ACTTCATCCA GCCCCGGATG
CTCCAGTCGC AGGAGCAGAT GGACCAGGGC ATGGACCGGG GCGACTACAC CTTCACCCTG
AACATCCCGC CCAAGTTCCA GCAGGACCTG CTGAACGGCC GGCAACCGAC CATCCAGCTC
AACGTCGACG CGACCCAGGT CAGCCAGGCT TTCACCGGCG CGGGACACAT CCAGCAGATC
GTGAGCACCG AGGTCGACGC CTTCGTCAAG CGCTACCGGG GCGAAGAGGC CGTTCCCGTG
CAGGCGGTGA TCCGCTCGGA GTTCAATCCC AACCTGACCC GCGCCTGGTT CGGTTCGATC
AACGAGGTGG TCAACCAGAT CACCATGCTG TCGATCATCC TCACCGGCGC GGCGCTGATC
CGCGAACGCG AGCACGGCAC CATTGAACAC CTGCTGGTGA TGCCGATCAC CCCGTTCGAG
ATCATGGTCT CCAAGGTCTG GGCGATGGGC CTGGTCGTGC TGCTGGCCTC CGGCCTGTCC
CTGCACTTCG TGGTGGAGGG CTGGCTGGGC GTGCCCATCG CCGGCTCGAT CCCGCTGTTT
CTGCTGGGTA CCGCCCTGCA CCTGTTCGCC ACCACCTCCA TGGGCATCTT CTTCGGCACC
GTCGCCCAGT CCATGCCGCA ACTGGGCATG CTGTTCATCC TGGTGCTGAT CCCGCTGCAG
ATCCTTTCCG GCGGCCAGAC ACCGCGCGAA AGCATGCCCG AGCCGGTGCA GAACATCATG
CTGGCCGCAC CCACCACCCA TTTCATCATA CTGGCCCAGG GCATCCTGTT CCGCGGCGCC
GGCCTTGCCG TGGTCTGGCC GCAGCTTCTC GCGATCGCCT CGATCGGCGG GGTGTTCTTC
GTCGGCGCCC TGTCGCGGCT GCGCAAGTCG CTGCGCTGA
|
|---|
| Protein sequence | MRKLSNILQL GLKELRSLYR DRTMLALIVY SFSLAIYSSA TGVPESPYRA TVAVIDEDRS
QVSARILDAF QMPYFIQPRM LQSQEQMDQG MDRGDYTFTL NIPPKFQQDL LNGRQPTIQL
NVDATQVSQA FTGAGHIQQI VSTEVDAFVK RYRGEEAVPV QAVIRSEFNP NLTRAWFGSI
NEVVNQITML SIILTGAALI REREHGTIEH LLVMPITPFE IMVSKVWAMG LVVLLASGLS
LHFVVEGWLG VPIAGSIPLF LLGTALHLFA TTSMGIFFGT VAQSMPQLGM LFILVLIPLQ
ILSGGQTPRE SMPEPVQNIM LAAPTTHFII LAQGILFRGA GLAVVWPQLL AIASIGGVFF
VGALSRLRKS LR
|
|---|
| |