Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_16260 |
Symbol | eexF |
ID | 7760561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 1606901 |
End bp | 1608319 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643804526 |
Product | Type I secretion outer membrane protein |
Protein accession | YP_002798816 |
Protein GI | 226943743 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCGTGC AACGCACGCC CTACATCATG TTTCTGGCCC TGGTGAGCGT CTCGGTACAG GCCGCGCCCC CACGGAGCGA TTCGACGCCG GCCGTGCCGT CCGGCGCGGA AAAACGGGAA GTCCGCGCCT CGGAATACAC CGCCGATCTG CTGCAGTTGT ACGGGGAGTC GCGGCTGGAG GACCCGCGGG TCCTGGCCGC CTATGCGCGC GCCCAGGCCG GCAAGGAGCG GCAACGCGAG GCGCTGGGAG AGTTGCTGCC GCAGGTCTCG GCGACCACCG TGTTCAGCCG CAACACGCGC GACGACGATG CGGCGCGTAG TTCCTACGAC ACGGAGCGTT ATTCCCTCAC CTTGACCCAG CATCTCTACA ACAAGCCCGC CTGGGAGAAT TACCAGCGCT TCAAGAGTCT GGCCAAACGC GACCAGTCCG AGGCCGAGGA TGCCCAGGCG GAAGCGGCCA TCGACCTGGC GCAGCGCTAT TTCGTCGCCC TGGCTTCCGA CGACGAGCTC GAGCTGGTCC TGGCCGAGCG CCGCGCCACC CAGAAGAACC TGGACCGCGT CAATGCGCTC TACGAAAAGC AACTGGCGAT GATCACCGAC GTCCTCGATC TCCGGGCGCG CATCGATGCG CTGGCCGCCG ACGAGGTCGA CGCGCGCAAC CAGGTTCGTC TCAGCCGCGA GGAGCTTTCC GAAGTCATCG GGCGCCCTGT GCAGGAGCGG CTCAGCCGTA TCCGCGACGA CATCGAACTG CAGGCTCCCC AGGAGACCCT GGAAGTCTGG ATCGATCGCG CCATCGCCGC CAACCCGGGG CTCAAGGCGC GGCAGGACGC GCTCGCGGCG GCCGATGCGG CCATCCGCGA AGGCAAGGGC GGGCACTATC CCTCCCTCAG TCTCAACCTG TCGGCGCTGC GCAGCGACGC CGGCTACGAC AACAACCAGA CGAACCGCTA CGACAACTAT TCGGCCGGTA TCGCCCTGCA GGTACCCATC TACAGCGGCG GTTCCACCTC CGCCCGGGTC CGTGCGCTGC ACAACGACCG GGATTCGGCC GAGCAGGAGC TCGAGGCGAT GCGGCGTCAG GTGTTCAAGG AAACCACCAG CTCCTATCTC ACGGCCCAGG CCAGCGTGGA GCGGATCCGC GCCTCGCGCA ATGCGCTCGA GTCGGCGAAG AAGTCCACGG AGGCCGCCGA AAAGGGCTTC CAGTTCGGCG TGGTGAACGC GGCCGACGTG TTGACCAACG TGCAGAACGA GTACCGGGCA CGGCGCGATC TCCTGCAAGC CCAGTACGAC TTCATCACCA ATCTTCTGAT TCTGAATCGC TGGGCCGGCA GGCTGTCCAA GCAGACCATC GAGAACGTCA ACATATGGCT CGCCCAGGGC GCTCCGGGGC GTGTCGCCAG GCGCAACGCA TCGCGCTGA
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Protein sequence | MTVQRTPYIM FLALVSVSVQ AAPPRSDSTP AVPSGAEKRE VRASEYTADL LQLYGESRLE DPRVLAAYAR AQAGKERQRE ALGELLPQVS ATTVFSRNTR DDDAARSSYD TERYSLTLTQ HLYNKPAWEN YQRFKSLAKR DQSEAEDAQA EAAIDLAQRY FVALASDDEL ELVLAERRAT QKNLDRVNAL YEKQLAMITD VLDLRARIDA LAADEVDARN QVRLSREELS EVIGRPVQER LSRIRDDIEL QAPQETLEVW IDRAIAANPG LKARQDALAA ADAAIREGKG GHYPSLSLNL SALRSDAGYD NNQTNRYDNY SAGIALQVPI YSGGSTSARV RALHNDRDSA EQELEAMRRQ VFKETTSSYL TAQASVERIR ASRNALESAK KSTEAAEKGF QFGVVNAADV LTNVQNEYRA RRDLLQAQYD FITNLLILNR WAGRLSKQTI ENVNIWLAQG APGRVARRNA SR
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