Gene Avin_15970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_15970 
Symbol 
ID7760532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1572061 
End bp1573404 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content58% 
IMG OID643804497 
ProductABC transporter, ATP binding component 
Protein accessionYP_002798787 
Protein GI226943714 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGATCA AGGTCGAAAA CCTGAGCAAA TGCTTTCATA TTTACGACAA GCCCCGCGAC 
CGCCTGCTGC AGATGCTTTG CCGGGGAAGG CGACGGTTCT TTCGCGAGTT CTGGGCATTG
CGGGACGTGG CATTCGACAT AAAAAAGGGC GAAACGGTTG GTATCGTCGG CCGTAATGGC
AGCGGCAAGT CCACGTTGCT GCAGATCATC TGCGGCACCC TGACACCCAC CTCCGGCCGG
GTGCGAACCG ATGGGCGTGT CGCCGCCCTG CTGGAGTTGG GTTCGGGATT CAACCCCGAA
TTCAGTGGGC GGGAGAACGT CTACATGAAT GCGGCGGTGC TGGGCCTGTC GAAAGAGGAA
ACCGATGCCC GCTTCGCCGA GATCGAAGCC TTTGCCGAGA TCGGCGATTT CATCGACCAG
CCGGTCAAGA CTTATTCCAG CGGGATGATG GTGCGGCTGG CCTTTGCGGT GGCGATCAAT
GTCGATCCGC AAATCCTTAT CGTCGACGAA GCATTATCGG TGGGCGACGA ATTGTTCCAG
CGCAAATGTT TCGCAAGGAT CGAAGCCATC AAGGCCAGTG GCGCGACCAT CCTTTTCGTA
TCGCATGCCG GCACTACTGT CATCGAGCTT TGCGACCGTG CGATTCTGAT GGATGGCGGC
GACAAACTTG CCGAAGGATT GCCCAAGGCG ATCATCGGCA AGTATCAGAA GCTCCTTTAT
GCGCCGGCGG GCAAGGTCGA GGCGATTCGT GCCGCGATCG CTGGCGATGG CCACAAGGAA
TCCCTGTTCG CCGAAACTTC GACCGTGTCG CCGGAAACCC TGGAGCAAGG GCGAGCCGAG
CCTGAACTGG ATGAATGCTT CGATCCGAAT CTGCGTTCGC AAAGCGTATT GTCCTACGAG
TCCCATGGGG TACTCATCGA GGCGCCGCAA ATTCTCGATC TTGCCGGCGA GCCGGTGAAT
TGCCTCAAGA GCGGCAAAAC CTATCGCTAT ACCTACCGGG CGAGCTTTGC CGTCGGCGCT
ACCGGAGTCC GCTTCGGCAT GATGATCAAG ACCCTGGCTG GGGTCGAATT GGGTGGGGCG
GCCAGTGCAG CCAGCCTGCA AGATGCCATT TCCCATGTGG AGAAAGGGAC GGTCATCCAG
GTCGAGTTCG CATTTCAGTG CAATCTCAAC CCGGGCACTT ACTTTCTGAA TGCCGGCGTA
CTCGGCGCGA CAGCAGAAAG CGAGACCTAT CTGCATCGTT TGCTGGATGC CTGCCTGTTC
CGCGTATTAT CGTCGGCGGA CAAAACGGCT ACTGGCGCTG TGGATTTCAA GTGTGTCCCA
GACTTCACTA TTTCGAATGA ATGA
 
Protein sequence
MAIKVENLSK CFHIYDKPRD RLLQMLCRGR RRFFREFWAL RDVAFDIKKG ETVGIVGRNG 
SGKSTLLQII CGTLTPTSGR VRTDGRVAAL LELGSGFNPE FSGRENVYMN AAVLGLSKEE
TDARFAEIEA FAEIGDFIDQ PVKTYSSGMM VRLAFAVAIN VDPQILIVDE ALSVGDELFQ
RKCFARIEAI KASGATILFV SHAGTTVIEL CDRAILMDGG DKLAEGLPKA IIGKYQKLLY
APAGKVEAIR AAIAGDGHKE SLFAETSTVS PETLEQGRAE PELDECFDPN LRSQSVLSYE
SHGVLIEAPQ ILDLAGEPVN CLKSGKTYRY TYRASFAVGA TGVRFGMMIK TLAGVELGGA
ASAASLQDAI SHVEKGTVIQ VEFAFQCNLN PGTYFLNAGV LGATAESETY LHRLLDACLF
RVLSSADKTA TGAVDFKCVP DFTISNE