Gene Avin_15950 details

Gene Information

• Locus tag: Avin_15950
• Symbol: rfbC
• ID: 7760530
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 1570675
• End bp: 1571223
• Gene Length: 549 bp
• Protein Length: 182 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 643804495
• Product: dTDP-4-dehydrorhamnose 3,5-epimerase
• Protein accession: YP_002798785
• Protein GI: 226943712
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes
• TIGRFAM ID: [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACGCCA CCCCGCTCGA TATTTCCGGT CTGGTCCTTT TCGAACCCAA GGTGTTCGGC 
GATGACCGTG GTTTCTTCTT CGAAAGCTAC AACCAGCGGC ATTTCGAGGA TGCCGTCGGT 
CGCGCGGTGA ATTTCGTCCA GGACAATCAT TCCCGCTCCG CGCAAGGGGT GTTGCGGGGA 
CTGCACTACC AGTTGCCGCC CCATGCCCAA GGCAAGCTGG TGCGGGTCGT ACAGGGTGAA 
GTGTTCGATG TCGCCGTGGA TATCCGCAAG TCGTCGCCTA CCTTCGGGCA GTGGGTCGGG 
GTGCTGCTAT CGGCGGAAAA CAAGCGGCAA TTCTGGATTC CGGAAGGCTT CGCGCATGGT 
TTCGTGACGC TTTCGGAGAC TGCCGAGTTC CTCTACAAGA CGACCGACTA CTACGCCCCG 
GACAGCGAAC GAAGCATTCT CTGGAACGAT CCCGCATTGG CGATCGACTG GCGCGGCATC 
GAGGCTCCGC TGCTTTCCGG CAAGGACCAG AAGGCTCCGC TGCTCGCCAA TGCCGAGGTT 
TTCCCATGA 

 

Protein sequence

MNATPLDISG LVLFEPKVFG DDRGFFFESY NQRHFEDAVG RAVNFVQDNH SRSAQGVLRG 
LHYQLPPHAQ GKLVRVVQGE VFDVAVDIRK SSPTFGQWVG VLLSAENKRQ FWIPEGFAHG 
FVTLSETAEF LYKTTDYYAP DSERSILWND PALAIDWRGI EAPLLSGKDQ KAPLLANAEV 
FP