Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_15730 |
Symbol | |
ID | 7760508 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 1543337 |
End bp | 1544485 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643804473 |
Product | Pseudouridine synthase |
Protein accession | YP_002798763 |
Protein GI | 226943690 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAAC GTGAAGAGAA TTCCCCGCCT GCCGCCCAAG GCGAGAAGCT GCAGAAGGTG CTGGCGCGCA TGGGCCTCGG CTCCCGGCGC GACATCGAGG CGCGGATCGC CGAAGGCCGG GTGATGGTCA ACGGGACCGT CGCCACGCTC GGCCAGCGTG TCGGCCGCCA CGACGCCATC GCCCTCGACG GCCGCCTGCT CAGGCGCGAG GAGGGCGCCG AACTGGTGCG CCGGGTGCTG ATCTACAACA AGCCCGACGG CGAGATCTGC ACTCGCAACG ACCCGGAGGG CCGGCCGACG GTGTTCGACC GCCTGCCGCG TCTGAAGGAG GGCCGCTGGG TCAACATCGG CCGGCTCGAC ATCAATACCA CCGGTCTGCT GCTGTTCACC ACCGACGGCG AACTGGCCAA CCGCCTGATG CATCCTTCCT ATGAAATGGA TCGCGAGTAC GCCGTGCGCG TGCGTGGCGA GGTCACCGAG GAGATGCTCG AAACCCTCAA GCGCGGCGTG ATGCTGGAGG ACGGCCCGGC GCGCTTCACC GACATCCAGG AGGCGCCCGG CGGCGAAGGC CTCAACCACT GGTTCCACTG CGTGGTGATG GAGGGACGCA ACCGCGAGGT ACGCCGCCTG TGGGAGTCCC AGGGGCTGGT GGTGAGCCGG CTGAAGCGGG TGCGCTTCGG TCCGGTGTTC ATGACGTCCG ACCTGGCCAT GGGCCGCTGG CGCGAGATGA CCCAGGACGA GGTGGACATC CTCAGCCGCG AAGTGGGGCT GGAGCCGCTG GCGCTGCCGG AGATGAAGCT CAGGTTTCGC GAGAAGATGG AGCGCCTGCA GCGCAAGTCG GCCAAGCCGG TCGGGCGCGG CGGGGCACGC GAGCGGGTGT TGCGTCCGGC CCACGAGGGG GCGGAGGCAC AGGAGCGCCG CGCTCCGCGC CGGCCGAAGG AGGAGCGTGC TCCGCGGGGC CGCGGCACGC CGGTCGCCGA GCGCCCCGCC GAATCCGTCC GCAAGCGTCC GGGACGGCCG GCCGGGGAGC GCTCGCCCGC CGAGTCGGGC GAACGTCCGG CGCGCAAGCC CGGGCCGGTG CCGGCCAAGC GCCGCAGTCC GCCGGCCGGC GAGGGGCAGC GTCCGGGATT CGGCCGCAAG TGCCCCTGA
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Protein sequence | MSEREENSPP AAQGEKLQKV LARMGLGSRR DIEARIAEGR VMVNGTVATL GQRVGRHDAI ALDGRLLRRE EGAELVRRVL IYNKPDGEIC TRNDPEGRPT VFDRLPRLKE GRWVNIGRLD INTTGLLLFT TDGELANRLM HPSYEMDREY AVRVRGEVTE EMLETLKRGV MLEDGPARFT DIQEAPGGEG LNHWFHCVVM EGRNREVRRL WESQGLVVSR LKRVRFGPVF MTSDLAMGRW REMTQDEVDI LSREVGLEPL ALPEMKLRFR EKMERLQRKS AKPVGRGGAR ERVLRPAHEG AEAQERRAPR RPKEERAPRG RGTPVAERPA ESVRKRPGRP AGERSPAESG ERPARKPGPV PAKRRSPPAG EGQRPGFGRK CP
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