Gene Avin_15280 details

Gene Information

• Locus tag: Avin_15280
• Symbol: efp
• ID: 7760463
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 1503118
• End bp: 1503684
• Gene Length: 567 bp
• Protein Length: 188 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 643804425
• Product: elongation factor P
• Protein accession: YP_002798718
• Protein GI: 226943645
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)
• TIGRFAM ID: [TIGR00038] translation elongation factor P

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.00757913
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAACCG CTCAAGAATT CCGTGCCGGC CAGGTAGCCA TGATCAATGG CGAGCCCTGG 
GTCATCCAGA AAGCCGAATT CAACAAGTCC GGCCGCAACG CCGCCGTGGT CAAGATGAAG 
CTGAAGAACC TGCTCAACGG CCAGGCCACC GAGACCGTGT ACAAGGCCGA CGACAAGTTC 
GAGCCGGTTA TCCTCGAGCG CAAGGAGGTG ACCTACTCCT ACTTCGCCGA TCCCATGTAC 
GTGTTCATGG ACAACGAATT CAACCAGTAC GAGATCGAGA AGGACGACTT GGGCGACGCC 
TACAACTTCA TCGAAGATGG CATGCAGGAC GTCTGCGAGG CGGTGTTCTA CAACGACCGC 
GTGATCTCCA TCGAACTGCC CACCACCATC GTGCGCCAGA TCTCCTACAC CGAGCCGGCC 
GTGCGCGGCG ACACTTCCGG CAAGGTGATG AAGGTGGCGC GCCTGAACAG CGGCTATGAG 
CTGAGGGTGG CCGAGTTCTG CGACATCGGT GACTACATCG AGATCGATAC CCGTACCTTC 
GAATACAAGT CCCGCGCCAA GGCCTGA 

 

Protein sequence

MKTAQEFRAG QVAMINGEPW VIQKAEFNKS GRNAAVVKMK LKNLLNGQAT ETVYKADDKF 
EPVILERKEV TYSYFADPMY VFMDNEFNQY EIEKDDLGDA YNFIEDGMQD VCEAVFYNDR 
VISIELPTTI VRQISYTEPA VRGDTSGKVM KVARLNSGYE LRVAEFCDIG DYIEIDTRTF 
EYKSRAKA