| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_15220 |
|---|
| Symbol | |
|---|
| ID | 7760457 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 1497784 |
|---|
| End bp | 1498596 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643804419 |
|---|
| Product | outer membrane protein, OmpA/MotB family |
|---|
| Protein accession | YP_002798712 |
|---|
| Protein GI | 226943639 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGGAT GGCCCGTTTT TTCGTTCGGC CTACTGTGCC TGGCTTCGCT GGGGGGCTGC
GCCACAAGCT CGCCGGAAAC GCTGCGTGCG CTCGACGAGG CCAGGGCCGA ACTGCTGGCC
ATTCGTACCG AGCCGGCGGT CCGGCTCAGC GCCGAGAAGG ACCTGGCCCG GGCCGAGGAG
TCGCTGGCCC GGGCGGAGCG CTTTTCCGGC TATCTGGGCA GCGAGGACGA TGTTCTGCAT
TACGCCTACC TGAGCCGGCG TTACGGCCAG ATCGCCCGCG AGCATGGAGC GCAGCGCCAG
GCCGCCGAGC GCCTCGTCGA ACTGGAGAAG GAACGCGACC GCCTGCAACT GGCGCTGAGC
GAGGCCCGCC TGCTCAACGC GGAGCAGCAG GGCGAGTGGC TCGAAGAGCA ATTGCTCGGC
CGGACCACCA CCGAAACCGA GCGCGGCCTG GTGATGACCC TGGGCGACGT GCTGTTCGAT
ACCGGGCGGG AGGAGTTGCG CTCGGCGGCG ACGCGCACCG TCGTGCAGGT GGCCAGGTTC
CTGCGTCTCA ACCAGCGGCG GGTGGTGCGC ATCGAGGGCT ATACCGACAG CCAGGGCGAT
GACCAGCTGA ACCTCGAGTT GTCCCGCGGG CGTGCCCAGT CGGTCAAGGA CATGCTGGTG
GACCTGGGTG TCGACGCCGG GCGTGTCCAG GTCGCCGGTT ACGGCGAGGC CTATCCGGTC
GCCGAGAACG CCTCCAGCCA GGGGCGCGCG CGCAATCGCC GGGTGGAGAT CGTGTTCTCC
GACGAGGAGG GCCGGCTGGG CGCGGAGCGC TGA
|
|---|
| Protein sequence | MKGWPVFSFG LLCLASLGGC ATSSPETLRA LDEARAELLA IRTEPAVRLS AEKDLARAEE
SLARAERFSG YLGSEDDVLH YAYLSRRYGQ IAREHGAQRQ AAERLVELEK ERDRLQLALS
EARLLNAEQQ GEWLEEQLLG RTTTETERGL VMTLGDVLFD TGREELRSAA TRTVVQVARF
LRLNQRRVVR IEGYTDSQGD DQLNLELSRG RAQSVKDMLV DLGVDAGRVQ VAGYGEAYPV
AENASSQGRA RNRRVEIVFS DEEGRLGAER
|
|---|
| |