Gene Avin_15080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_15080 
SymbolmphC 
ID7760443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1485319 
End bp1486185 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content66% 
IMG OID643804405 
Product2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase 
Protein accessionYP_002798698 
Protein GI226943625 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.625795 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTACCG CACAGACCCT TAGCGAAGCC GCCACCAGCC GCTTCGTCTG CATCGAAGAG 
GGCGATCTCG CCCTGCAACT GCACTACAAC GACTGCGGCG CGGGCGCTGA AACCCTGGTC
ATGCTGCATG GCTCCGGACC GGGCGCCAGC GGCTGGGCCA ACTTCAACCG CAACGTCGAA
CCCATGGTCG CCGCCGGCTA CCGGGTGATC CTGATGGACT GTCCGGGCTG GAGCAAGAGC
GATCCCATCG TCTGCACCGG CTCGCGCTCG GACCTCAACG CCCGCGCGCT GAAGGGCCTG
CTCGATGCCA TCGGCATCGA CCGCGCGCAC CTCATCGGCA ACTCCATGGG CGGCCACAGC
GCCGTGGCCT TCGCCCTGGC CAACCCCGAA CGGGTCGGCA AGCTGGTGCT GATGGGCGGC
GGCACCGGCG GCGCCAGTCC CTTCGCGCCG ATGCCGACCG AAGGCATCAA GCTGCTGCAG
GGGCTCTACC GCGAGCCGAC CATCGACAAC CTGAAGAAGA TGATGAACGT CTTCGTCTAC
GACACCGGCG ATCTGACCGA GGAACTGTTC CAGACCCGCC TCGACAACAT GCTGAGCCGC
CGCGACCACC TGGAGAACTT CGTCGAGAGC CTGGCGGCCA ACCCGAAGCA GTTCCCCGAC
TTCGGCCTGC GGCTGGCCGA GATCAAGGCA CAGACCCTGA TCGTCTGGGG CAGCAACGAC
CGCTTCGTAC CCATGGACAC CGGCCTGCGC CTGCTCGCCG GCCTGCCCAA TGCGGAACTG
CATGTGTTCA ACCGCTGCGG CCACTGGGCG CAGTGGGAGC ATGCGGATCG GTTCAACCGC
TTGGTGCTGG ACTTCCTCCG CCATTGA
 
Protein sequence
MTTAQTLSEA ATSRFVCIEE GDLALQLHYN DCGAGAETLV MLHGSGPGAS GWANFNRNVE 
PMVAAGYRVI LMDCPGWSKS DPIVCTGSRS DLNARALKGL LDAIGIDRAH LIGNSMGGHS
AVAFALANPE RVGKLVLMGG GTGGASPFAP MPTEGIKLLQ GLYREPTIDN LKKMMNVFVY
DTGDLTEELF QTRLDNMLSR RDHLENFVES LAANPKQFPD FGLRLAEIKA QTLIVWGSND
RFVPMDTGLR LLAGLPNAEL HVFNRCGHWA QWEHADRFNR LVLDFLRH