Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_15080 |
Symbol | mphC |
ID | 7760443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 1485319 |
End bp | 1486185 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643804405 |
Product | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase |
Protein accession | YP_002798698 |
Protein GI | 226943625 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.625795 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTACCG CACAGACCCT TAGCGAAGCC GCCACCAGCC GCTTCGTCTG CATCGAAGAG GGCGATCTCG CCCTGCAACT GCACTACAAC GACTGCGGCG CGGGCGCTGA AACCCTGGTC ATGCTGCATG GCTCCGGACC GGGCGCCAGC GGCTGGGCCA ACTTCAACCG CAACGTCGAA CCCATGGTCG CCGCCGGCTA CCGGGTGATC CTGATGGACT GTCCGGGCTG GAGCAAGAGC GATCCCATCG TCTGCACCGG CTCGCGCTCG GACCTCAACG CCCGCGCGCT GAAGGGCCTG CTCGATGCCA TCGGCATCGA CCGCGCGCAC CTCATCGGCA ACTCCATGGG CGGCCACAGC GCCGTGGCCT TCGCCCTGGC CAACCCCGAA CGGGTCGGCA AGCTGGTGCT GATGGGCGGC GGCACCGGCG GCGCCAGTCC CTTCGCGCCG ATGCCGACCG AAGGCATCAA GCTGCTGCAG GGGCTCTACC GCGAGCCGAC CATCGACAAC CTGAAGAAGA TGATGAACGT CTTCGTCTAC GACACCGGCG ATCTGACCGA GGAACTGTTC CAGACCCGCC TCGACAACAT GCTGAGCCGC CGCGACCACC TGGAGAACTT CGTCGAGAGC CTGGCGGCCA ACCCGAAGCA GTTCCCCGAC TTCGGCCTGC GGCTGGCCGA GATCAAGGCA CAGACCCTGA TCGTCTGGGG CAGCAACGAC CGCTTCGTAC CCATGGACAC CGGCCTGCGC CTGCTCGCCG GCCTGCCCAA TGCGGAACTG CATGTGTTCA ACCGCTGCGG CCACTGGGCG CAGTGGGAGC ATGCGGATCG GTTCAACCGC TTGGTGCTGG ACTTCCTCCG CCATTGA
|
Protein sequence | MTTAQTLSEA ATSRFVCIEE GDLALQLHYN DCGAGAETLV MLHGSGPGAS GWANFNRNVE PMVAAGYRVI LMDCPGWSKS DPIVCTGSRS DLNARALKGL LDAIGIDRAH LIGNSMGGHS AVAFALANPE RVGKLVLMGG GTGGASPFAP MPTEGIKLLQ GLYREPTIDN LKKMMNVFVY DTGDLTEELF QTRLDNMLSR RDHLENFVES LAANPKQFPD FGLRLAEIKA QTLIVWGSND RFVPMDTGLR LLAGLPNAEL HVFNRCGHWA QWEHADRFNR LVLDFLRH
|
| |