Gene Avin_15030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_15030 
Symbol 
ID7760438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1480337 
End bp1481470 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content69% 
IMG OID643804400 
Productcysteine desulfurase protein 
Protein accessionYP_002798693 
Protein GI226943620 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0520] Selenocysteine lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATGCCA TCCACGACGA ATTTCCGCAG CTGGCCGGGC TGCGCTACCT CAACCACGCC 
GCCGTCGCCC CCTGGCCGAT GCGGGCCGGC AAGGCGGTGA GCGCCTTCGC CGAGCAGAAC
GTGCACATCG GTGCGCGCGA TTACCCTCGC TGGCTGGGCA TCGAACGGCG CCTGCGCGAA
CGCCTGACGC GCCTGCTCAA CGCACCGACC ACGGCGGACA TAGCCTTGGT CAAGAACACC
TCGGAAGCCC TGTCCTTCGT CGCCTTCGGC CTGGACTGGC AGGCCGGCGA GCGGATCGTC
ATCAGCGACG AGGAGTTCCC CTCCAACCGC ATCGTCTGGG AGGCGCTCAA GCCCCAGGGC
GTCGAGATCG TCACGGTCGG CCTCAAGGGG GCCGATCCGG AAGCCGATCT GTTGGCGGCC
TGCGGCCCGC GCACGCGCCT CCTGTCGATC AGCGCCGTGC AATACGCCAG CGGCCTGCGC
CTGGATCTGG AGCGGCTCGG CCAGGGTTGC CGGCAGCTCG GCGTGCTGCT CTGCGTCGAC
GCCATCCAGC AGCTCGGCGC CCTGCCCTTC GACGTGCGCG CCTGCGACTG CGCCTTCGCC
ATGGCCGACG GACACAAGTG GATGCTCGGC CCGGAGGGGC TCGGCGTGTT CTACTGCCGC
AGCGACCTGC GCGAACGGCT CAAGCTGCAC GAATACGGCT GGCACATGCT GGAGAACGCC
GGCGACTACG ACCGCCTCGA CTGGGAACCG GCGCGCACCG CCCGGCGCTT CGAATGCGGC
AGCCCGAACA TGCTCGGTGC CGTGGCACTG GAAAGCAGCC TGTCGCTGCT GGAGCAGGTC
GGCATGGCCA CGGTCGCCCA GGGACTGCGC GAACGGGTGG CCTGGCTCGA AGAAGGCCTC
CTGCGGATTC CCGGCCTGCA CCTGCGCAGC CCGCGCGATC CCGAGCGGCG CGCCGGCATC
CTGACCTTCG CACTCGACGG CTGGGACAAC CAGCAGTTGT TCGAGCGCCT CAAGCACGAG
CAGATCGTCT GCGCCCAGCG TGGCGGCGGA ATCCGTCTGT CGCCGCATTT CTACACGCCG
ACCGTGGTGC TCGACGAAAC CCTCGCGGTC CTGCGCCAGC TGGCATCCGA TTAG
 
Protein sequence
MHAIHDEFPQ LAGLRYLNHA AVAPWPMRAG KAVSAFAEQN VHIGARDYPR WLGIERRLRE 
RLTRLLNAPT TADIALVKNT SEALSFVAFG LDWQAGERIV ISDEEFPSNR IVWEALKPQG
VEIVTVGLKG ADPEADLLAA CGPRTRLLSI SAVQYASGLR LDLERLGQGC RQLGVLLCVD
AIQQLGALPF DVRACDCAFA MADGHKWMLG PEGLGVFYCR SDLRERLKLH EYGWHMLENA
GDYDRLDWEP ARTARRFECG SPNMLGAVAL ESSLSLLEQV GMATVAQGLR ERVAWLEEGL
LRIPGLHLRS PRDPERRAGI LTFALDGWDN QQLFERLKHE QIVCAQRGGG IRLSPHFYTP
TVVLDETLAV LRQLASD