Gene Avin_14970 details

Gene Information

• Locus tag: Avin_14970
• Symbol: tmk
• ID: 7760432
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 1476364
• End bp: 1476999
• Gene Length: 636 bp
• Protein Length: 211 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 643804394
• Product: thymidylate kinase
• Protein accession: YP_002798687
• Protein GI: 226943614
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0125] Thymidylate kinase
• TIGRFAM ID: [TIGR00041] thymidylate kinase

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGCCGAG GTCTGTTCAT CACCCTCGAA GGGCCGGAGG GGGCCGGCAA GAGCACCAAT 
CGCGACTACC TCGCCGAAGG CCTGCGCGCC GCTGGCCGCG AGGTGGTGCT GACTCGCGAG 
CCGGGCGGAA CGCCGCTGGC CGAGCGCATC CGCGAACTGC TGCTGGCGCC CGCCAGCGAG 
CCGATGGCGG TGGACACCGA ACTGCTGCTG GTCTTCGCCG CCCGCGCCCA GCATCTGGCC 
GGTGTGATCC GGCCGGCGCT GGTGCGCGGC GCCGTGGTGC TCTGCGACCG TTTCACCGAT 
GCTTCCTATG CCTACCAGGG CGCTGGCCGT GGCGTGCCCG AGGCGCGCAT CGCGATCCTG 
GAGCATTTCG TGCAGGGCGA TCTGCGCCCC GACCTGACCC TGCTCTTCGA CCTGCCGGTC 
GAGGTGGGGC TGGCCCGCGC CGCCGCCCGT GGCCGCCCGG ATCGTTTCGA ACAGGAAGAC 
CGCGCCTTCT TCGAAGCGGT GCGCCAGGCT TACCTGCGTC GCGCGGCGAA CGATTCGGCC 
CGGTACCGGG TGGTGGATGC GGGGCGCCCC CTGGCGGAGG TCCAGCGCAC ACTGGATGGC 
CTGCTGCCGC AACTGCTGGA GTCGCGCGGT GGCTGA 

 

Protein sequence

MSRGLFITLE GPEGAGKSTN RDYLAEGLRA AGREVVLTRE PGGTPLAERI RELLLAPASE 
PMAVDTELLL VFAARAQHLA GVIRPALVRG AVVLCDRFTD ASYAYQGAGR GVPEARIAIL 
EHFVQGDLRP DLTLLFDLPV EVGLARAAAR GRPDRFEQED RAFFEAVRQA YLRRAANDSA 
RYRVVDAGRP LAEVQRTLDG LLPQLLESRG G