| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_14960 |
|---|
| Symbol | |
|---|
| ID | 7760431 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 1475291 |
|---|
| End bp | 1476367 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643804393 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002798686 |
|---|
| Protein GI | 226943613 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1559] Predicted periplasmic solute-binding protein |
|---|
| TIGRFAM ID | [TIGR00247] conserved hypothetical protein, YceG family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAAAAT GGCTGCTGCT GCTGGAAAGT GGCCTGCTGG TGGGGGGACT GCTCCTGTCG
TCCGCCGTCT GGCAGCAGAG GGCCGCGCTC GAACAGCCTC TGAGGCTCGC CGAGGAGCGT
CTGCTGGAGG TTCCGAGCGG TGCCACGCCC GGCGGTCTGC TCAATCGTCT GCAGGACGAG
GGACTGTTGC ACGGGAGCTT CTGGCTGCGC CTGTACTGGC GCTTCAATCT GTCCGAGCAG
GGTATGCGCA GCGGCGAATA TCGCCTGGAG CCAGGCATGA CGGCCGCCGA ACTGCTCGAA
CTCTGGCAGC GTGGCGAGGT GGTGCAGTAC AACCTCACTT TGGTGGAGGG CTGGAGCTTC
CGTCAGGTTC GGGCCGCATT GGCCCGGACC GACAAACTGG AGCAGTCCCT GGAAGGGGTT
TCCGATGCCG AGCTGATGGC TCGGCTGGGT CAGCCGGACG CCCACCCGGA GGGGCGCTTC
TTCCCCGATA CCTACCGCTA TGTGCGCGGC ATGAGCGACT TCGAGCTGCT CAGGCAGGCC
CATGCCCGCC TGCAGCAGGT GCTCGCCGAG GAATGGGCCG GGCGGTCGCC GGACCTGCCC
TACGCGACGC CCTACGAGGC GCTGATCATG GCCTCGATCG TCGAGAAGGA AACCGGCATT
CCCCGCGAAC GCGAGCAGAT CGCCGGCGTG TTCGTGCGGC GCCTGGAACA GGGCATGCTG
CTGCAGACCG ATCCGACGGT CATCTATGGC CTGGGCGAGC GCTACAACGG CAAGCTCGGG
CGCGCCGAGC TGCTCGCGAC CACGCCCTAC AACACCTATG TCCAGCCCGG CCTGCCACCG
ACGCCGATCG CCCTGCCGGG ACGCGAGGCG ATCCATGCGG CGCTGCATCC GGCGGAGGGC
CGCGAGCTGT ATTTTGTCGC CCGCGGCGAT GGTAGCCATA TCTTTTCCGA AACCCTGGAG
GCGCACAACC AGGCGGTGCG CGAGTACCAG CTCAAGCGCC GCACCGACTA CCGCTCCAGC
CCATCGTCCG AGGCGGTGGA GCGTTCCGAG CGGCAAGACG ACGAGGAAAA CCCGTGA
|
|---|
| Protein sequence | MRKWLLLLES GLLVGGLLLS SAVWQQRAAL EQPLRLAEER LLEVPSGATP GGLLNRLQDE
GLLHGSFWLR LYWRFNLSEQ GMRSGEYRLE PGMTAAELLE LWQRGEVVQY NLTLVEGWSF
RQVRAALART DKLEQSLEGV SDAELMARLG QPDAHPEGRF FPDTYRYVRG MSDFELLRQA
HARLQQVLAE EWAGRSPDLP YATPYEALIM ASIVEKETGI PREREQIAGV FVRRLEQGML
LQTDPTVIYG LGERYNGKLG RAELLATTPY NTYVQPGLPP TPIALPGREA IHAALHPAEG
RELYFVARGD GSHIFSETLE AHNQAVREYQ LKRRTDYRSS PSSEAVERSE RQDDEENP
|
|---|
| |