Gene Avin_14440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_14440 
SymbolfadB 
ID7760380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1423463 
End bp1425610 
Gene Length2148 bp 
Protein Length715 aa 
Translation table11 
GC content68% 
IMG OID643804342 
Productmultifunctional fatty acid oxidation complex subunit alpha 
Protein accessionYP_002798635 
Protein GI226943562 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID[TIGR02437] fatty oxidation complex, alpha subunit FadB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.308219 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCTATA AAGGGAAAGC CATCAGGGTT CAGGCCCTCG GGGATGGCAT CGCCGAGATG 
CAGTTCGACC TCGAGGGCGA TTCCGTCAAC AAATTCAACC GCCTCACGCT GAACGAGTTC
CGCCAGGCGG TCGATGCGCT GCAGGCGGAG ACTTCGCTCA AGGGTGTGCT GGTTTCCAGC
GCCAAGGGTA TGTTCATCGT TGGCGCCGAT ATCACCGAAT TCCTCGAACT GTTCCGGGCG
CCCGAGGAAG AGCTGCGCGG TTGGTGCCTG GAGATCAACC GGATCTTCTC GGATTTCGAG
GACCTGCCGG TGCCGACCGT GGTCGCGATC AACGGTCTGG CTCTCGGTGG CGGCTTCGAG
ATGTGCCTGG CCTGCGACTT CCGGGTGATG GCCGAGTCGG CCAGAGTGGG TCTGCCGGAG
GTCAAGCTGG GGATCAACCC CGGCTTCGGC GGCACCGTGC GCCTGCCGCG GCTGATCGGC
AGCGACAATG CCATCGAGTG GATCGCCGCC GGCAAGGAGA ACGGCGCCGC CGAGGCGCTC
AAGGTCGGCG CGGCGGATGC CGTGGTCGCC GACGAGCGGC TGCGCGAGGC GGCCCTCGAC
CTGCTGAAGC GGGCCGCCGC CGGCGAGCTG GACTTCCGCG CCCGCCGCCA GCCGAAACTG
GAGCCGCTCA AGCTCGGCAA CATCGAACAG ATGATGGCCT TCGAGAGCGC CAAGGCCTAC
GTGGCCGCCC AGGCCGGTCC GCATTATCCG GCGCCCCTGG CGGCGGTGAA GACCATCCAG
AAGGCCGCCA ACTCCGCGCG CGAGGCGGCG CTGGAGATCG AGGTCGGCGG CTTCGTCAAG
CTGGCCGCCA CCACGGTGGC GCAGAGCCTG GTCGGGCTGT TCCTCAACGA GCAGGAGCTC
AAGCGCAAGG CCAGGAAATA CGACAAGGAC GCCCGCGAGG TGAAGCAGGC GGCGGTGCTC
GGTGCCGGCA TCATGGGCGG CGGCATCGCC TACCAGTCGG CGCTCAAGGG GACGCCGATC
CTGCTGAAGG ACATTCGCGA GGAGTCCATC CGCCAGGGTC TGGCCGAGGC CGACAAGCAG
CTCGCCAAGC GGGTGGAGAA AGGCCGCCTG ACGGTGGGGC AGATGGCCGA GGTGCTCAAC
GGCATCCGTC CGACCCTGTC CTACGGTGAT TTCCCCCAGG TCGACCTGGT GGTCGAGGCG
GTGGTCGAGC GGCTAGAGGT CAAGCAGGCG GTGCTCGCCG AGGTGGAGGC CCAGGTGCCG
GGGGAGGCAG TGATCGCCTC CAACACCTCG ACCATCTCCA TCAGCCGGCT GGCCGACTCG
CTCAAGCGTC CGCAGCGCTT TTGCGGCATG CACTTCTTCA ACCCGGTGCC GCTGATGCCG
CTGGTGGAGG TCATCCGCGG CCGGCAGACC GACGAGCGGA CCATCGCCAC CACCGTCGCC
TACGCGCGCA AGATGGGCAA GACGCCCATC GTGGTCAACG ACTGTCCGGG ATTCCTGGTC
AACCGCGTGC TCTTTCCGTA TCTCGCCGGC TTCACCCGGC TCCTGGCCGC CGGCATCGAC
TTCCGGCGCA TCGACCGGGT GATGGAAGGG TTCGGCTGGC CGATGGGGCC GGCCTACCTG
CTCGATGTGG TCGGTATCGA CACGGCGGTG CATGCGCGCA ACGTGCTCGC CGAAGGCTAT
CCCGAGCGGA TGAAGGAGGA GGGCGATACC GCCATCGACG TGCTGCTCAG GGCCGGCCGT
CTCGGCCAGA AGAGCGGCAG CGGCTTCTAC GCCTACGAGC GCGACGGCGG CGCCAAGCCG
AAGAAGCTGG AGGACCCGCG GGCGGCCGAA CTGCTCGGTC CGCTGGTGCG CGAGACGGGC
GAGCTGGACG ACGAGGAGAT CGTCGCGCGG CTGATGCTGC CGCTGTGCCT GGAGGCGGTG
CGCTGCCTGG AGGAGGGCAT CGTCGAGTCG GCCGCCGAGG CGGACATGGG CCTGATCTAC
GGCATCGGTT TCCCGCCCTT CCGCGGCGGT GCGCTGCGCT ACATCGACAC CCTCGGCGTC
GCCCGCTTCG TCGAACTGGC CGACCGCCAC GCCGACCTGG GGCCGCTGTA CCGACCGACC
GAACAACTGC GCGAAATGGC CCGTCAGGGC CGTACGTTCT TTGCCTGA
 
Protein sequence
MIYKGKAIRV QALGDGIAEM QFDLEGDSVN KFNRLTLNEF RQAVDALQAE TSLKGVLVSS 
AKGMFIVGAD ITEFLELFRA PEEELRGWCL EINRIFSDFE DLPVPTVVAI NGLALGGGFE
MCLACDFRVM AESARVGLPE VKLGINPGFG GTVRLPRLIG SDNAIEWIAA GKENGAAEAL
KVGAADAVVA DERLREAALD LLKRAAAGEL DFRARRQPKL EPLKLGNIEQ MMAFESAKAY
VAAQAGPHYP APLAAVKTIQ KAANSAREAA LEIEVGGFVK LAATTVAQSL VGLFLNEQEL
KRKARKYDKD AREVKQAAVL GAGIMGGGIA YQSALKGTPI LLKDIREESI RQGLAEADKQ
LAKRVEKGRL TVGQMAEVLN GIRPTLSYGD FPQVDLVVEA VVERLEVKQA VLAEVEAQVP
GEAVIASNTS TISISRLADS LKRPQRFCGM HFFNPVPLMP LVEVIRGRQT DERTIATTVA
YARKMGKTPI VVNDCPGFLV NRVLFPYLAG FTRLLAAGID FRRIDRVMEG FGWPMGPAYL
LDVVGIDTAV HARNVLAEGY PERMKEEGDT AIDVLLRAGR LGQKSGSGFY AYERDGGAKP
KKLEDPRAAE LLGPLVRETG ELDDEEIVAR LMLPLCLEAV RCLEEGIVES AAEADMGLIY
GIGFPPFRGG ALRYIDTLGV ARFVELADRH ADLGPLYRPT EQLREMARQG RTFFA