Gene Avin_14060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_14060 
Symbolrnt 
ID7760343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1374442 
End bp1375050 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content56% 
IMG OID643804299 
Productribonuclease T 
Protein accessionYP_002798598 
Protein GI226943525 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID[TIGR01298] ribonuclease T 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCACC GCTTTCGCGG CTACTTGCCG GTCGTGGTAG ATGTCGAGAC AGGTGGCTTC 
AATAGTGCTA CCGATGCCCT GCTGGAAATT GCAGCCATTA CCATTGGCAT GGACGAGCAA
GGTCTCCTGT TTCCCGAACA CAGTCACTTC TTCCGGGTCG AGCCTTTCGA AGGCGCCAAT
ATCGAAGCAG CAGCCCTGGA GTTCACGGGA ATCAAGCTGG ATCACCCTCT GCGAATGGCG
GTTAGCGAGG AACACGCCCT GCAGGAAATC TTCCGAGGCG TACGCAAGGC GGTCAAGTCC
CACGGATGCA AACGCGCTAT TTTAGTGGGC CACAACAGCA GCTTCGATTT GGCCTTTCTC
AATGCAGCCG TGGCCCGTTG TGACATCAAG CGCAATCCCT TTCACCCCTT CTCCAGCTTC
GATACTGCTA CCCTGGCAGG GCTTGCCTAT GGCCAAACCG TGCTTGCCAA AGCATGCCAA
AGTGCAGGTA TCGAATTCGA TGGCCGCGAG GCCCACTCGG CGCGCTATGA CACGGAAAAA
ACTGCCGAGT TGTTCTGCGG CATCGTCAAT CGGTGGAAGG AAATGGGCGG CTGGGTAGAT
TTTGCTTGA
 
Protein sequence
MAHRFRGYLP VVVDVETGGF NSATDALLEI AAITIGMDEQ GLLFPEHSHF FRVEPFEGAN 
IEAAALEFTG IKLDHPLRMA VSEEHALQEI FRGVRKAVKS HGCKRAILVG HNSSFDLAFL
NAAVARCDIK RNPFHPFSSF DTATLAGLAY GQTVLAKACQ SAGIEFDGRE AHSARYDTEK
TAELFCGIVN RWKEMGGWVD FA