Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_14060 |
Symbol | rnt |
ID | 7760343 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 1374442 |
End bp | 1375050 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643804299 |
Product | ribonuclease T |
Protein accession | YP_002798598 |
Protein GI | 226943525 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
TIGRFAM ID | [TIGR01298] ribonuclease T |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGCACC GCTTTCGCGG CTACTTGCCG GTCGTGGTAG ATGTCGAGAC AGGTGGCTTC AATAGTGCTA CCGATGCCCT GCTGGAAATT GCAGCCATTA CCATTGGCAT GGACGAGCAA GGTCTCCTGT TTCCCGAACA CAGTCACTTC TTCCGGGTCG AGCCTTTCGA AGGCGCCAAT ATCGAAGCAG CAGCCCTGGA GTTCACGGGA ATCAAGCTGG ATCACCCTCT GCGAATGGCG GTTAGCGAGG AACACGCCCT GCAGGAAATC TTCCGAGGCG TACGCAAGGC GGTCAAGTCC CACGGATGCA AACGCGCTAT TTTAGTGGGC CACAACAGCA GCTTCGATTT GGCCTTTCTC AATGCAGCCG TGGCCCGTTG TGACATCAAG CGCAATCCCT TTCACCCCTT CTCCAGCTTC GATACTGCTA CCCTGGCAGG GCTTGCCTAT GGCCAAACCG TGCTTGCCAA AGCATGCCAA AGTGCAGGTA TCGAATTCGA TGGCCGCGAG GCCCACTCGG CGCGCTATGA CACGGAAAAA ACTGCCGAGT TGTTCTGCGG CATCGTCAAT CGGTGGAAGG AAATGGGCGG CTGGGTAGAT TTTGCTTGA
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Protein sequence | MAHRFRGYLP VVVDVETGGF NSATDALLEI AAITIGMDEQ GLLFPEHSHF FRVEPFEGAN IEAAALEFTG IKLDHPLRMA VSEEHALQEI FRGVRKAVKS HGCKRAILVG HNSSFDLAFL NAAVARCDIK RNPFHPFSSF DTATLAGLAY GQTVLAKACQ SAGIEFDGRE AHSARYDTEK TAELFCGIVN RWKEMGGWVD FA
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