Gene Avin_14020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_14020 
Symbol 
ID7760339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1370159 
End bp1371268 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content62% 
IMG OID643804295 
ProductABC transporter, ATP binding component 
Protein accessionYP_002798594 
Protein GI226943521 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCACT CCCTACTGCT CAACCTGCGC AATCTCGTCT GCGGCTACCA GGGCCACAGG 
GTCGTCCAGC AGATCAACCT TCACCTGAAC GCGGGCGATA TCGGCTGCCT GCTTGGCCCG
TCCGGTTGCG GCAAGACAAC CACCCTGCGC GCCATCGCAG GCTTCGAATC GGTACAGGAA
GGCGAGATCC AGCTCGCTGG CGAAATAATC TCCCGTGCCG GCTTCACCCT GGCCCCGGAG
AAGCGACGCA TGGGCATGGT ATTCCAGGAC TATGCACTGT TTCCGCACCT CACGGTGGCA
GAGAACGTCG CCTTCGGTAT CCGCAAGCAC CCGCAGCGAG AACGCATCAC CGCCGAGTTG
CTGGAGTTGG TCAAGCTCGC CCATCTCGTG CAGCGCTACC CCCACGAACT GTCCGGTGGT
CAGCAGCAAC GTGTGGCGCT TGCCCGTGCC CTGGCGCCGG AGCCACAGTT GCTGCTGCTC
GACGAGCCCT TCTCCAACTT GGACGTGGAA TTGCGCCGCA AGCTCAGCCA CGAGGTGCGC
GATATCCTCA AGGCACGCGG AACCAGCGCA ATACTGGTGA CTCATGATCA GGAAGAGGCC
TTCGCGGTCA GCGATCATGT CGGCGTATTC AGAAATGGCC ATCTGGAGCA GTGGGATACT
CCCTACAACC TCTATCACGA ACCGCTCACC CCCTTCGTCG CCAGCTTCGT CGGCCAGGGC
TATTTCATTC GCGGCCAGTT ACTGAGCCCG GAGACGGTGC AGACCGAACT CGGCGTGATT
CAGGGCAACC GTGCCTACAC CTGCCCAGTC GGTAGTTCCG TGGAGGTCCT GTTGCGCCCG
GACGACATCG TCTACACGCC CGACAGCGCC TTGAAGGCCA CCATCACCGG CAAAACCTTC
CTCGGCGCCT CCACTTTCTA TCGCCTGCGG CTTCCCACCG GCAGCCCGCT GGAAGCAGTC
TTCCCCAGCC ATATCGACCA CCAGCCCGGG GAACAGGTCG GCATCGGTGT GGCGGCCGAG
CATCTGGTGA TTTTCCCCAT CCCGGACAAT GGCTCCCTCC AGCCCGATCC GACGAGTTCC
GGCGTGCGTC GTTACAGCGA GGCATGCTGA
 
Protein sequence
MTHSLLLNLR NLVCGYQGHR VVQQINLHLN AGDIGCLLGP SGCGKTTTLR AIAGFESVQE 
GEIQLAGEII SRAGFTLAPE KRRMGMVFQD YALFPHLTVA ENVAFGIRKH PQRERITAEL
LELVKLAHLV QRYPHELSGG QQQRVALARA LAPEPQLLLL DEPFSNLDVE LRRKLSHEVR
DILKARGTSA ILVTHDQEEA FAVSDHVGVF RNGHLEQWDT PYNLYHEPLT PFVASFVGQG
YFIRGQLLSP ETVQTELGVI QGNRAYTCPV GSSVEVLLRP DDIVYTPDSA LKATITGKTF
LGASTFYRLR LPTGSPLEAV FPSHIDHQPG EQVGIGVAAE HLVIFPIPDN GSLQPDPTSS
GVRRYSEAC