Gene Avin_13780 details

Gene Information

• Locus tag: Avin_13780
• Symbol: rnc
• ID: 7760315
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 1338911
• End bp: 1339600
• Gene Length: 690 bp
• Protein Length: 229 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 643804271
• Product: ribonuclease III
• Protein accession: YP_002798570
• Protein GI: 226943497
• COG category: [K] Transcription
• COG ID: [COG0571] dsRNA-specific ribonuclease
• TIGRFAM ID: [TIGR02191] ribonuclease III, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGCGCAT CCCTGAACCG TCTTGAGCGC AAGCTCGGCC ATACTTTCAA GAACCAGGAT 
CTGATGCTCC TGGCGCTGAC TCATCGCAGT TTTGCCAGTC GAAACAATGA GAGGCTGGAG 
TTTCTCGGCG ATGCCATCCT CAATTTCGTC GCTGGCGAAG CCTTGTTCGA GCGCTTCCCT 
CAGGCGAAGG AGGGGCAGCT GTCGCGTCTG CGGGCCCGGC TGGTCAAGGG CGAAACCCTG 
GCCTTGCTGG CCCGTGGCTT CGATCTCGGT GATCATTTGC GGCTTGGCTC CGGTGAGCTG 
AAAAGCGGCG GCTTTCGGCG TGAATCCATT CTTGCCGATG CTCTCGAGGC ATTGATTGGG 
GCCATCTACC TCGACGCCGG TCTGAATACG GTGCGCGAGC GTGTCCTGGG TTGGCTGGCC 
GGCGAACTGG ATAGCCTGAC CCTGGTCGAC ACCAACAAGG ACCCCAAAAC CCGCCTGCAG 
GAATTTCTCC AGTCCAGGGC TTGCGAACTG CCCCGTTATG AGGTGGTGGA CATCCAGGGT 
GAGCCGCATT GCCGGACGTT CTTCGTCGAA TGCCGAGTGG CTTTGCTGAA CGACAAAACT 
TATGGCCAGG GGGCCAGCCG TCGCATCGCC GAGCAGGTGG CGGCAGCGGC GGCGCTGGTG 
GCCCTTGGAG TGGAGAATGG CAATGACTGA 

 

Protein sequence

MSASLNRLER KLGHTFKNQD LMLLALTHRS FASRNNERLE FLGDAILNFV AGEALFERFP 
QAKEGQLSRL RARLVKGETL ALLARGFDLG DHLRLGSGEL KSGGFRRESI LADALEALIG 
AIYLDAGLNT VRERVLGWLA GELDSLTLVD TNKDPKTRLQ EFLQSRACEL PRYEVVDIQG 
EPHCRTFFVE CRVALLNDKT YGQGASRRIA EQVAAAAALV ALGVENGND