| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_13270 |
|---|
| Symbol | ddl |
|---|
| ID | 7760269 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 1291484 |
|---|
| End bp | 1292431 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643804229 |
|---|
| Product | D-alanine--D-alanine ligase |
|---|
| Protein accession | YP_002798528 |
|---|
| Protein GI | 226943455 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
|---|
| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.122637 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCACG CCCTGAAGTC CACACTGGCT CCGCAAGCCT TCGGTCGTGT CGCCGTACTG
TTCGGCGGCA AGAGCGCCGA GCGGGCGGTC TCCCTGAAGT CCGGCCAGGC CGTGCTGGAA
GCGCTGCAGA GCGCCGGCGT GGACGCTTTC GGCATCGACG TCGGCGACGA CCTGCTCGAG
CGACTGGGTC GCGAGCGGAT CGATCGGGCC TTCATCGTCC TGCATGGCCG TGGCGGCGAG
GATGGCAGCA TGCAGGGCCT GCTCGAATGT GTCGGCATTC CCTACACCGG CAGCGGCGTT
CTCGCTTCGG CCCTGGCGAT GGACAAGCTG CGCACCAAGC AGGTCTGGCA GAGCCTGGGG
TTGCCGACGC CGCGCCATGC GGTGCCGACC AGCGAGAGCG ACTGCCGGGC CGCCGCACGG
GATCTCGGTT TTCCGCTGAT CGTCAAGCCG GCCCACGAAG GCTCGAGCAT CGGCATGGCC
AAGGTGAATG ACATCGACGA ACTGATCGCC GCCTGGCTGT CTGCCCGCTC CCATGACCCC
CAGGTGCTGG TCGAGCAGTG GATCCAGGGG CCGGAGTTCA CCGTCGCCCT ATTGCGTGGG
CAGGTGTTAC CTCCGATCGG TCTGGGCACG CCGCACAGTT TCTACGATTA CGACGCCAAG
TATCTGGCCT CGGATACCCA GTACCGGATT CCCTGCGGGC TCGATTCCAG CAAGGAGGAG
GAGTTGAAGG CGTTGTGCGC GCGTGCCTGC GAGGCGGTGG GGGTGCAGGG TTGGGCGCGG
GTCGACGTGA TGCAGGACGC GGAGGGCCGC TTCTGGCTGC TTGAAGTCAA TACGGTGCCG
GGCATGACCG ATCATAGTCT GGTGCCGATG GCCGCGCGTG CCGCGGGACT GGATTTCCAG
CAACTGGTGC TGGCGGTTCT GGCCGACAGC GTCGAGGCAA GGGGCTGA
|
|---|
| Protein sequence | MNHALKSTLA PQAFGRVAVL FGGKSAERAV SLKSGQAVLE ALQSAGVDAF GIDVGDDLLE
RLGRERIDRA FIVLHGRGGE DGSMQGLLEC VGIPYTGSGV LASALAMDKL RTKQVWQSLG
LPTPRHAVPT SESDCRAAAR DLGFPLIVKP AHEGSSIGMA KVNDIDELIA AWLSARSHDP
QVLVEQWIQG PEFTVALLRG QVLPPIGLGT PHSFYDYDAK YLASDTQYRI PCGLDSSKEE
ELKALCARAC EAVGVQGWAR VDVMQDAEGR FWLLEVNTVP GMTDHSLVPM AARAAGLDFQ
QLVLAVLADS VEARG
|
|---|
| |