Gene Avin_13030 details

Gene Information

• Locus tag: Avin_13030
• Symbol: nfi
• ID: 7760245
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 1268088
• End bp: 1268753
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 643804205
• Product: endonuclease V
• Protein accession: YP_002798504
• Protein GI: 226943431
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1515] Deoxyinosine 3'endonuclease (endonuclease V)

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCCCGACT CGCCTTTCGG TGACTGGGAT GGCACGCCCG CCGGAGCCCG TCTTCTGCAG 
CAGGAACTGG CCGGGCGGGT TGTGTTGCGC GACGATTTTC CCGATCTGGG CCTGATAGCC 
GGCGTGGATG TCGGTTTCGA AGAGGGTGGG GGCATCACGC GAGCGGCGGC GGTGCTGCTC 
GATGCCAATA CCCTGGGAGT GCTTGCCGAG AGTCTGGTAC GCATTCCGAC TTCTATGCCC 
TATATTCCGG GATTGCTGTC CTTTCGCGAG CTTCCTGCCG TTCTGCGCGC CCTGGCGGAG 
TTGCCGCGGG TTCCTGATCT GGTTTTCTGC GATGGGCAGG GGATAGCCCA TCCACGCAGA 
TTGGGCATTG CGGCCCATCT GGGAGTAGTC AGCGGCCTGC CAACCATTGG TGTGGCCAAG 
AAGATTCTCG TTGGTACCCA TGCGGAGTTG GGTTCCCACC GCGGAGATCA GGTTCCTCTG 
ATGTATCGGG GCGAGGTGCT GGGAGCGGTG CTGCGCAGCA AGGATCGGGT GCGTCCCCTG 
ATCGTTTCTC CGGGGCATCG CGTCAGTCTG GCCAGCGCGC CACGATTGGT CATGGCTTGT 
GTTACGCGTT ATCGCTTGCC CGAGCCGACC CGTCTGGCCG ATCGGCTTGC TTCGCGCAGA 
GCCTGA 

 

Protein sequence

MPDSPFGDWD GTPAGARLLQ QELAGRVVLR DDFPDLGLIA GVDVGFEEGG GITRAAAVLL 
DANTLGVLAE SLVRIPTSMP YIPGLLSFRE LPAVLRALAE LPRVPDLVFC DGQGIAHPRR 
LGIAAHLGVV SGLPTIGVAK KILVGTHAEL GSHRGDQVPL MYRGEVLGAV LRSKDRVRPL 
IVSPGHRVSL ASAPRLVMAC VTRYRLPEPT RLADRLASRR A