Gene Avin_13000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_13000 
Symbol 
ID7760242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand+ 
Start bp1264673 
End bp1265305 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content61% 
IMG OID643804202 
Producthypothetical protein 
Protein accessionYP_002798501 
Protein GI226943428 
COG category[R] General function prediction only 
COG ID[COG2945] Predicted hydrolase of the alpha/beta superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCGAATC GCGAAAACTC CCTGTTCATC GATGGACCCT GTGGCCCACT CGAGGCTCTT 
TACCTTGAGA TACCGCAGGC CCGCGGCCTG GCGCTGCTCT GCCATCCCAA TCCGGTGAAG 
GGCGGGACCA TGCTGAACAA GGTCGTCTCC ACCCTGCAAC GTACCGCCCG GGATGCCGGC 
TACAGTACGC TGCGCTTCAA CTATCGGGGC GTCGGCGCCA GCGCAGGCGA TCACGACATG 
GGTAGCGGCG AGGTAGATGA TGCCGAAGCG GTCGTTCGTT GGGTACGCGG GCAGTTGCCG 
CAGCTACCCT TGAATATTTT CGGCTTTTCC TTCGGTGGCT ATGTCGCACT CAATCTTGCG 
GAGCGCCTGG CTGTACTGGG GCAGGTGCCG GAGCGGATGT TCCTGGTCGC GCCGGCGGTG 
ATGCGCCTGG ATCGTGCAAC GATGATTGTG CCACAGGGTA GTGACCTGAC GATCATCCAG 
CCGGAACAGG ACGAGGTGGT CAGCCCGCAA TTGGTCTACG ACTGGTCGGC AGCCCTGCAG 
CGTCCCCATG AGTTACTGAA AGTGGCAGAA TGCGGGCATT TCTTCCATGG CAGGCTGGGC 
GAGTTGAAGG ACTTGGTCAG TTCGCGCCTC TGA
 
Protein sequence
MSNRENSLFI DGPCGPLEAL YLEIPQARGL ALLCHPNPVK GGTMLNKVVS TLQRTARDAG 
YSTLRFNYRG VGASAGDHDM GSGEVDDAEA VVRWVRGQLP QLPLNIFGFS FGGYVALNLA 
ERLAVLGQVP ERMFLVAPAV MRLDRATMIV PQGSDLTIIQ PEQDEVVSPQ LVYDWSAALQ 
RPHELLKVAE CGHFFHGRLG ELKDLVSSRL