Gene Avin_12950 details

Gene Information

• Locus tag: Avin_12950
• Symbol: algW
• ID: 7760237
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: -
• Start bp: 1258768
• End bp: 1259919
• Gene Length: 1152 bp
• Protein Length: 383 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 643804197
• Product: Htr-like protease
• Protein accession: YP_002798496
• Protein GI: 226943423
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
• TIGRFAM ID: [TIGR02037] periplasmic serine protease, Do/DeqQ family; [TIGR02038] periplasmic serine pepetdase DegS

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTAAAGG CCCTGCGTTT TCTTGGCTGG CCCCTGGCGG TCGGAGTGCT GCTGGCCCTG 
CTGATCATCC AGCGTTATCC GGAGTGGGTC GGCTTGCCCC GGCAGCTTGC CGATGAGCAG 
CAACTGTCCC GCTCCATCCT CGCTCCCCAA GGCCCCGTCT CCTATGCCAA TGCCGTGAGC 
AGCGCCGCAC CGGCGGTAGC CAACCTGTAC ACCACCAAGG TCGTCAAGAA ATCGAACCAG 
CCGCTGTTCG ACGATCCACT GCTGCAACAG TACTTCGGCA ACTCCCTGCC CAGTCAGCGG 
CGCCTGGAAT CCAGCCTGGG GTCTGCGGTG ATCATGCGCC GGGATGGCTA CCTGCTGACC 
AACAACCACG TCACCGCCGG TGCCGACCAG ATCGTCGTCG CCCTGCGGGA CGGACGGGAA 
GTCCTCGCCC GGGTGATAGG CAACGATTCG GAAACCGATC TGGCCGTGCT CAAGATCGAT 
CTGGACGAAT TGCCGGTCAT GCATCTCGGA CGCTCCGACA GCATCCGCAT CGGTGATGTC 
GCCCTGGCCA TCGGCAACCC CTTCGGCGTC GGCCAGACCG TGACCATGGG CATCATCAGC 
GCCACCGGGC GCAACCAACT GGGCTTGAAT ACCTACGAGG ACTTCATCCA GACCGATGCA 
GCGATCAATC CGGGCAATTC GGGCGGCGCG CTGATCGATG CCAATGGCTA TCTGATCGGC 
ATCAATACCG CCATTTTCTC CAAGTCGGGC GGATCCCAGG GTATCGGCTT CGCGATTCCG 
GCCAAGCTTG CCCTGGAGGT GATGGAGGAA ATCATCAAGC ACGGTCAGGT AATTCGCGGC 
TGGCTCGGAC TCGAGGTGCA ACCACTGACC AAGGAGTTGG CCGAATCCTT CGGCCTGGAA 
GGCCGGCCAG GCATCGTCGT CGCCGGCATA TACCGTGACG GCCCCGCACA ACGGGCCGGT 
CTGCAGCCGG GCGACCTGAT CGTCAGTATC GATGGCCAGC CGGCCACCGA TGGACGCCAT 
GCCATGAATC AGGTCGCCCA GACTCGACCG GGAGAAACCA TCGAAATCGA GGTCCTGCGC 
AACGGCCAAG CCCTCACCCT TAGCGCCGAG ATCGGCCTGC GCCCGCCACC CACCGCCGTG 
CAGCAGCCAT GA 

 

Protein sequence

MLKALRFLGW PLAVGVLLAL LIIQRYPEWV GLPRQLADEQ QLSRSILAPQ GPVSYANAVS 
SAAPAVANLY TTKVVKKSNQ PLFDDPLLQQ YFGNSLPSQR RLESSLGSAV IMRRDGYLLT 
NNHVTAGADQ IVVALRDGRE VLARVIGNDS ETDLAVLKID LDELPVMHLG RSDSIRIGDV 
ALAIGNPFGV GQTVTMGIIS ATGRNQLGLN TYEDFIQTDA AINPGNSGGA LIDANGYLIG 
INTAIFSKSG GSQGIGFAIP AKLALEVMEE IIKHGQVIRG WLGLEVQPLT KELAESFGLE 
GRPGIVVAGI YRDGPAQRAG LQPGDLIVSI DGQPATDGRH AMNQVAQTRP GETIEIEVLR 
NGQALTLSAE IGLRPPPTAV QQP