Gene Avin_12560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_12560 
Symbol 
ID7760199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand+ 
Start bp1222279 
End bp1222839 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content66% 
IMG OID643804159 
ProductResponse regulator RegA/PrrA/ActR type 
Protein accessionYP_002798458 
Protein GI226943385 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG4567] Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.555573 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAGC ATCCGATCGA GGGAGAAGAA CAGCAGCCGC ACCTGCTGCT GGTGGACGAC 
GACACGACCT TCACCCGGGT CATGATGCGG GCCATGACCC GCCGTGGCTT CCGGGTGAGT 
TGTGCCAGTT CGGCCGAGGA GGGGTTGGAG CTGGCGCTTC AGGACGTGCC GGACTATGCC 
GTGCTGGATC TCAAGATGGA GGGCGACTCG GGGCTGGTGC TGCTGCCGAA GCTGCTCGAA 
CTGGACAGCG AGATGCGCGT GCTGATCCTC ACCGGTTACT CGAGCATCGC CACCGCCGTG 
GAGGCGATCA AGCGTGGCGC CTGCAACTAC CTGTGCAAGC CGGCCGACGC CGACGACGTG 
CTCACCGCGC TGCTTTCCGA GCACGTCGAC CTGAACAGCC TGGTGCCGGA CAACCCCATG 
TCGGTGGATC GCCTGCAGTG GGAGCACATC CAGCGCGTGC TCAGCGAGAA CGACGGCAAC 
ATCTCCGCCA CCGCCCGCGC CCTGGGTATG CACCGGCGTA CATTGCAGCG CAAGCTGCAG 
AAGCGTCCGG TCCGCCGCTG A
 
Protein sequence
MSEHPIEGEE QQPHLLLVDD DTTFTRVMMR AMTRRGFRVS CASSAEEGLE LALQDVPDYA 
VLDLKMEGDS GLVLLPKLLE LDSEMRVLIL TGYSSIATAV EAIKRGACNY LCKPADADDV 
LTALLSEHVD LNSLVPDNPM SVDRLQWEHI QRVLSENDGN ISATARALGM HRRTLQRKLQ 
KRPVRR