| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_12320 |
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| Symbol | speC |
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| ID | 7760175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | + |
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| Start bp | 1195702 |
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| End bp | 1196865 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643804135 |
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| Product | Ornithine decarboxylase |
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| Protein accession | YP_002798434 |
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| Protein GI | 226943361 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGATCA AGATCGAAGA CTACTACCCA CCCGCCACTT TCCAGCGCAT GAAGGCCTTC
GCCGACAAGC AGGAAACGCC CTTCGTCGTC ATCGATACCG AGATCATCGC CAACGCCTAC
GAGGAACTGG GCGACTGTTT CCCCTTCGCC CGCATCTACT ACGCGGTGAA GGCCAACCCG
GCGGTGGAGA TCATTCGCCT GCTGCGCGAC AAGGGCTCGA ACTTCGACAT CGCCTCGCGC
TACGAGCTGG ACAAGGTGAT GGCCGAAGGC GTCGGTCCCG AGCGCGTCAG CTACGGCAAC
ACCATCAAGA AGGCCAAGGA CATCCGCTAC TTCTACGAGA AGGGCGTGCG CCTGTTCGCC
ACCGATTCCG AGGCCGACCT GCGCAACATC GCCAAGGCCG CGCCGGGCTC CAAGGTCTAT
GTGCGCATCC TCACCGAGGG CACCGCGTCG GCCGACTGGC CGCTGTCGCG CAAGTTCGGC
TGCCAGCCGG ACATGGCCCT GGACCTGATG ATCCTCGCCC GCCAGTTGGG CCTGGTGCCC
TACGGCCTGT CCTTCCACGT GGGCAGCCAG CAGCGCGACA TCGACGTCTG GGACGCGGTG
ATCGCCAAGG TCAAGGTGAT CTTCGAGCGC CTCAAGCAGG AAGACGGCAT CGAGCTGAAG
ATGATCAACA TGGGCGGCGG TTTCCCGGCC AACTACATCA CCAAGACCAA CAGCCTGCAG
ACCTATGCCG AGGAAATCAT CCGCTTCCTC AAGGAAGACT TCGGCGAGGA ACTGCCGGAG
ATCATCCTCG AGCCGGGCCG CTCGCTGATC GCCAACGCCG GCATCCTGGT CAGCGAAGTG
GTGCTGGTCT CGCGCAAGTC GCGCACCGCC GTGGAGCGCT GGGTGTACAC CGACGTGGGC
AAGTTCTCCG GTCTGATCGA GACCATGGAC GAGGCCATCA AGTACCCGAT CTGGACCGAG
AAGAAGGGCG AGATGGAAGA GGTGGTGATC GCCGGGCCGA CCTGCGACAG CGCCGACATC
ATGTACGAGA ACTACAAGTA CGGCCTGCCG CTCAACCTGG CCAGCGGCGA CCGCCTGTAC
TGGCTGTCCA CCGGCGCCTA TACCACCAGT TACAGCGCCG TGGAGTTCAA CGGCTTCCCG
CCGCTGAAGT CCTATTATCT ATAA
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| Protein sequence | MSIKIEDYYP PATFQRMKAF ADKQETPFVV IDTEIIANAY EELGDCFPFA RIYYAVKANP
AVEIIRLLRD KGSNFDIASR YELDKVMAEG VGPERVSYGN TIKKAKDIRY FYEKGVRLFA
TDSEADLRNI AKAAPGSKVY VRILTEGTAS ADWPLSRKFG CQPDMALDLM ILARQLGLVP
YGLSFHVGSQ QRDIDVWDAV IAKVKVIFER LKQEDGIELK MINMGGGFPA NYITKTNSLQ
TYAEEIIRFL KEDFGEELPE IILEPGRSLI ANAGILVSEV VLVSRKSRTA VERWVYTDVG
KFSGLIETMD EAIKYPIWTE KKGEMEEVVI AGPTCDSADI MYENYKYGLP LNLASGDRLY
WLSTGAYTTS YSAVEFNGFP PLKSYYL
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