| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_12070 |
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| Symbol | pilD |
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| ID | 7760148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 1159685 |
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| End bp | 1160554 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643804108 |
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| Product | type IV Pilus Prepilin peptidase, PilD |
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| Protein accession | YP_002798407 |
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| Protein GI | 226943334 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0974512 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCATCG TCGATCTTCT GGCCGGCCCC GGACTGGCCT TCGCCGTTTT CGCGGGGCTG
CTGGGCCTGC TGGTCGGCAG CTTTCTCAAC GTGGTCGTCC ACCGCCTGCC GAAGATGATG
CTGCACGACT GGCAGGCACA GGCGCGGGAA GTGCTGGAAC TGCCCAACGA GCCTCCCGGC
GAGCCTTTCA ATCTGCTGCT GCCCCACTCC CATTGCCCAC ATTGCGGGCA CGCGATCAGG
CCCTGGGAGA ACATCCCCCT GCTCAGCTGG CTGCTCCTGG GTGGCCGCTG CTCGGCCTGC
AAGGCCCGGA TCGGCGCGCG CTACCCCCTG GTGGAGCTGA CCTGCGGGCT GCTTTCGGCC
CATGTCGCCT GGCATTACGG CTTCGGCTGG CAAGCCGGCG CCATGTTGTT GCTCGGCTGG
GCTCTGCTGG CCATGAGCCT GATCGACTAC GATCATCAAC TGCTGCCGGA TTCGCTGGTG
CTGCCGCTGC TCTGGCTGGG CCTGATCCTC AACAGCTTCA GTCTGTTCGT TTCCCTGGAG
GACGCCCTCT GGGGCGCGGT GACCGGCTAC CTCAGCCTGT GGTCGGTGTA CTGGCTGTTC
AAGCTGTTCA CCGGCAAGGA AGGCATGGGC TACGGCGACT TCAAGCTGCT GGCGATGCTC
GGCGCCTGGG GTGGCTGGCA GATCCTGCCG CTGACCGTAC TGCTCTCCTC GCTGGTCGGC
GCCATGCTGG GGATCGTCAT CCTGCGCCTG CGCAAGGCCG AAAGCGGCAC GCCGATCCCC
TTCGGTCCCT TTCTCGCCTT CGCCGGCTGG ATCGCCCTGC TCTGGGGCGA GCAGATCACC
GCCGGCTACC TGCGCTTCGC CGGTCTGTAA
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| Protein sequence | MSIVDLLAGP GLAFAVFAGL LGLLVGSFLN VVVHRLPKMM LHDWQAQARE VLELPNEPPG
EPFNLLLPHS HCPHCGHAIR PWENIPLLSW LLLGGRCSAC KARIGARYPL VELTCGLLSA
HVAWHYGFGW QAGAMLLLGW ALLAMSLIDY DHQLLPDSLV LPLLWLGLIL NSFSLFVSLE
DALWGAVTGY LSLWSVYWLF KLFTGKEGMG YGDFKLLAML GAWGGWQILP LTVLLSSLVG
AMLGIVILRL RKAESGTPIP FGPFLAFAGW IALLWGEQIT AGYLRFAGL
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