| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_11960 |
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| Symbol | clpB |
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| ID | 7760138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | + |
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| Start bp | 1147811 |
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| End bp | 1150375 |
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| Gene Length | 2565 bp |
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| Protein Length | 854 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643804097 |
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| Product | ATP-dependent protease |
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| Protein accession | YP_002798399 |
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| Protein GI | 226943326 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAATCG ACCGATTGAC CAGCAAACTG CAACTTGCCT TGTCCGATGC CCAGTCCGTG
GCAGTCGGCC TCGACCACGC CGCCATCGAG CCGCTACACC TGATGCAGGC GCTGCTCGAT
CAACAGGGGG GCTCGATCAG GCCGCTCCTG ATGCAGGTCG GCTTCGATAT CAACGGCCTG
CGCCAGGCTC TGAGCAAGGA GCTGGATCAA CTGCCCAAGC TGCAGAACCC CACTGGCGAC
GTGAATCTGT CCCAGGACCT GGCGCGTCTG CTCAACCAGG CGGACCGCTT GGCCCAGCAG
AAGGGGGATC AGTTCATTTC CAGCGAACTG GTGCTGCTCG CCGCGCTGGA CGGCAACACC
CGCCTGGGCA AGCTGCTGCT TGGCCAGGGC GTGTCGAAGA AGGCTATCGA GAACGCCATC
GGTAACCTGC GTGGCGGCCA GACGGTGAAC GATCCGAATG CCGAGGAGTC CCGCCAGGCC
CTGGACAAGT ACTGCGTCGA CATGACCGCC CGGGCCGAGG AGGGCAAGCT CGACCCGGTG
ATCGGACGCG ACGACGAGAT CCGCCGCACC ATCCAGGTGC TGCAGCGGCG TACCAAGAAC
AACCCGGTGC TGATCGGCGA GCCGGGTGTC GGCAAGACCG CCATCGTCGA AGGCCTCGCC
CAGCGCATCG TCAACGGCGA GGTGCCGGAC GGACTCAGGG ACAAGCGCCT GCTGGCGCTG
GACATGGGTT CGCTGATCGC CGGCGCCAAG TTCCGCGGCG AGTTCGAGGA GCGCCTGAAG
GCCGTGCTCA ACGAGCTGGC CAAGCAGGAG GGGCGCGTCA TCCTGTTCAT CGACGAACTG
CACACCATGG TCGGCGCCGG CAAGGCCGAA GGCGCCATGG ATGCCGGCAA CATGCTCAAG
CCCGCTCTGG CGCGTGGCGA GCTGCATTGC GTCGGCGCCA CCACCCTCGA CGAGTACCGC
CAGTACATCG AGAAAGATGC CGCGCTGGAG CGCCGCTTCC AGAAGGTGCT GGTGGACGAG
CCGAGCGAGG AGGACACCAT CGCCATCCTG CGCGGCCTGA AGGAGCGCTA CGAGGTGCAC
CATGGAGTGA CCATCACCGA CGGCGCCATC ATCGCTGCGG CCAAGCTGTC GCACCGCTAC
ATCACCGACC GCCAACTGCC GGACAAGGCC ATCGACCTGA TCGACGAGGC GGCCAGCCGC
ATTCGCATGG AGATCGACTC CAAGCCCGAG GAACTGGATC GCCTGGATCG CCGGCTGATC
CAGCTGAAGA TCGAGCGTGA GGCGCTGAAG AAGGAAACCG ACGAGGCGAC CAAAAAGCGC
CTGGCCAAGT TGGAAGAGGA CATCGCCAAG CTCGAGCGCG AGTACGCCGA CCTCGAGGAG
ATCTGGAAGT CGGAGAAGGC CGAGGTGCAG GGCTCGGCAC AGATCCAGCA GCAATTGGAG
CAGGCCAAGC TGGATCTGGA GGCGGCACGC CGCAAGGGTG ATCTGAACCG GATGGCCGAG
CTGCAGTACG GTTTGATTCC GGAGCTGGAG CGCAAGCTGG CCTCCGCCGA CGGCGGGCAG
CCGCGGGAGA ACCAGTTGTT GCGCAATCGT GTCACCGACG AGGAGATCGC CGAGGTGGTC
TCCAAGTGGA CCGGCATCCC GGTGGCCAAG ATGCTCGAGG GCGAGCGCGA GAAGCTGCTG
AAGATGGAGG AGTTGCTGCA TCAGCGGGTG ATCGGCCAGA ACGAGGCGGT GACCGCCGTG
GCCAATGCGG TGCGGCGTTC CCGCGCCGGG CTCGCCGATC CGAACCGGCC GAGCGGCTCC
TTCCTGTTCC TCGGCCCGAC CGGGGTCGGC AAGACCGAGC TGTGCAAGGC GCTGGCCGAG
TTCCTCTTCG ATACCGAGGA GGCCCTGGTG CGCATCGACA TGTCCGAGTT CATGGAGAAG
CACTCGGTAG CCCGCTTGAT CGGCGCCCCT CCGGGGTATG TCGGCTATGA GGAGGGCGGC
TACCTGACCG AGGCGGTGCG CCGCAAGCCT TACTCCGTGG TGCTGATGGA CGAGGTGGAA
AAGGCTCACC CCGATGTGTT CAACATCCTT CTGCAGGTGC TGGAGGACGG TCGTCTGACC
GATAGCCACG GGCGTACCGT GGACTTCAAG AACACCGTGG TGGTGATGAC TTCCAACCTT
GGTTCGGCGC AGATCCAGGA GCTGGCCGGC GATCGCGAGG CGCAGCGGGC GGCGGTGATG
GATGCGGTAA GCCACCATTT CCGGCCGGAG TTCATCAACC GCATCGACGA GGTGGTGGTA
TTCGACCCGC TGGCCCGCGA GCAGATCGCC GGCATCGCCG AGATTCAGTT GAAGCGCCTG
CGCCAGCGTC TGGCCGAGCG CGAGCTGAGC CTCGAACTTT CCGATGAGGC CCTGGACAAG
CTGATCGCCG TCGGTTACGA CCCGGTCTAC GGGGCACGGC CCCTGAAGCG GGCGATCCAG
CGCTGGATCG AGAACCCGCT GGCGCAGCAG ATTCTCGCCG GGCAGTTCGC GCCTGGCGCG
AAGATCTTCG CCAGGGTGGA GGGCGACGAG ATCGTCTTTG GCTGA
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| Protein sequence | MRIDRLTSKL QLALSDAQSV AVGLDHAAIE PLHLMQALLD QQGGSIRPLL MQVGFDINGL
RQALSKELDQ LPKLQNPTGD VNLSQDLARL LNQADRLAQQ KGDQFISSEL VLLAALDGNT
RLGKLLLGQG VSKKAIENAI GNLRGGQTVN DPNAEESRQA LDKYCVDMTA RAEEGKLDPV
IGRDDEIRRT IQVLQRRTKN NPVLIGEPGV GKTAIVEGLA QRIVNGEVPD GLRDKRLLAL
DMGSLIAGAK FRGEFEERLK AVLNELAKQE GRVILFIDEL HTMVGAGKAE GAMDAGNMLK
PALARGELHC VGATTLDEYR QYIEKDAALE RRFQKVLVDE PSEEDTIAIL RGLKERYEVH
HGVTITDGAI IAAAKLSHRY ITDRQLPDKA IDLIDEAASR IRMEIDSKPE ELDRLDRRLI
QLKIEREALK KETDEATKKR LAKLEEDIAK LEREYADLEE IWKSEKAEVQ GSAQIQQQLE
QAKLDLEAAR RKGDLNRMAE LQYGLIPELE RKLASADGGQ PRENQLLRNR VTDEEIAEVV
SKWTGIPVAK MLEGEREKLL KMEELLHQRV IGQNEAVTAV ANAVRRSRAG LADPNRPSGS
FLFLGPTGVG KTELCKALAE FLFDTEEALV RIDMSEFMEK HSVARLIGAP PGYVGYEEGG
YLTEAVRRKP YSVVLMDEVE KAHPDVFNIL LQVLEDGRLT DSHGRTVDFK NTVVVMTSNL
GSAQIQELAG DREAQRAAVM DAVSHHFRPE FINRIDEVVV FDPLAREQIA GIAEIQLKRL
RQRLAERELS LELSDEALDK LIAVGYDPVY GARPLKRAIQ RWIENPLAQQ ILAGQFAPGA
KIFARVEGDE IVFG
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