Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_11550 |
Symbol | |
ID | 7760097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 1105374 |
End bp | 1108787 |
Gene Length | 3414 bp |
Protein Length | 1137 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643804057 |
Product | ATP-dependent dsDNA exonuclease SbcC |
Protein accession | YP_002798359 |
Protein GI | 226943286 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0419] ATPase involved in DNA repair |
TIGRFAM ID | [TIGR00618] exonuclease SbcC |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.055976 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGATCC TCAGCCTGCG CCTGAAGAAC CTCAACTCGC TGAAGGGCGA GTGGAAGATC GATTTTCGCG AAGCGCCGTT CAGGGACAAC GGCCTGTTCG CCATCACCGG GCCGACCGGC GCCGGCAAGA CCACCCTGCT CGACGCCATC TGCCTGGCTC TCTATCACCG CACGCCGCGC ATGGACCGTT TATCCAAGGA GTCCAACGAG CTGATGACCC GGCACACCGC CGAGTGCCTG GCCGAGGTGG AATTCGAGGT GAAGGGCCGG GGCTACCGCG CCTTCTGGAG CCAGCGCCGC GCCCGTGACC GGGCCGACGG CGCGCTGCAG ATGCCCAGGG TCGAGCTGGC CGCGGCGGAC GGCAGCATCC TCGCCGACAA GGTCGGCGAC AAGCTGGCGC GGATCGAGGC GCTCACCGGC CTCGACTTCG CGCGTTTCAC CCGCTCCATG CTGCTCGCCC AGGGCGGTTT CGCCGCCTTT CTCGAGGCCG ATGCGAAGAG CCGCGCCGAA CTTCTGGAGC AGCTCACCGG CACCGACATC TACGGGCGGA TCTCCCAGCG GGTGTTCGAA CATGCCCGCG AGGCGAAGGT GGCCCTCGAA CGGCTGCAGG AGCGGGCCGC CGGAGTCGAG CTGCTGGATG ACGGGGAGCG CCGAGCCCTG GAAGAGCGGG CCGCCGTGCT GGCCGCCGAG GAGGCGCCGT TGCTGGCGCG CCAGGGCGAG CTGCAGGCCC GGCGCCAGTG GCGCGCGGAG CTGGAGCAGG CGGAGCTGCG CTGCCGGGAG GCGGGGGAGG CGAGTCGACG AGCCGGCTTG GCGCTGGCCG AAGCCGCGCC GCAACTGGCC CGGCTGGCGG CCGGCGAGCC GGCCGCCGCG TTGCTGCCTG CGCATCGGGA CTGGCAGCAG GCGTGCCAGC AACTGGAGCA GGGCGAGCGC AATCTGACGC AGATCCGTGC CGAGCGGCGC CAGGCCGGCG AGGCGGTCGG CCTGCATCTG TGGCAGGCCG GCCAATTCGC CCGGCGGATC GCCGTGGCGG CGCAGGAGCA GGCCCGGCGG TTGCACTCGC AGCACCGGCA ACTGGCCGAG CAATTGGCCG AACAGCCACG GTATGCCGAG CTGGGCGAGC GCCTCGGTGC CTGGCGCGAA CGATTCGAAT GCCACCGCCA GTGGCAGGAA GAGATCGCCG CGCTCCAGGA CCGGCAGCGA AACGAACAGG CCGCGCTCGC CGAGCTGGGC GAAAGGCAGC GGCAGGCGCA GGAGCATCTG CGGCGCCGGC AGGCCGAGCT GGACAGCGCC TGCGCGGCCG AACGCCAGGC CCGCGAGAGT CTGGACACGC TGCTGCAGGG CGAGCCCGAA AGCGCGCTGC GCGAACACTG GCGGCAGGCG CAGTCCCGCC GCAACCTGCT GCAGCAACTG GAGCAGAATG CCCGCCAGCG CGGCAGCGGC GAAGCGCGTC TGGCCGCCAT CGACGCCGAA CTGGCCGACG GTCGGCGGCG GCATGGCGAG CAGCAGGCGC GTCTCGAATT GCTGCGCCAG CGTTACAGGG ATTCGCAGGC GCTGGTCGCG GCGAGGAAAA AACTGCTGGA GCAGGAGCGG CGCATTCTCG ATCTGGAAGC CCAGCGGAGC CAGTTGCAGC CGGGCGAGCC CTGCCCGCTG TGCGGCTCCC GCGAGCATCC GGCCGTCGAC ACCTACCGGG CGCTGGACCT TTCCGCCGGC GAACGGGACT TGCAGGCCGC CGAGGCGGAG CTGGAGGCGC TACTCCGCGA AGGCGAGGCG GCACGGGACG CGCTGGCCGT GCTCGACGCC GAACTCGGGG CGCTGCGCCG GCGCCGCGAA CAGGACGGGG ACGAGTTGCG CCGGCAGCGT GAACAGTGGC GGCAACTGTG TGCGGAGCTG GGCACGGAGC CAATCGATCT GGCGGCCATC CGGGATGCGC TGGACGAACG GCTGGCGGCA TTCGAAGGGC GTCTGCAACA GCTCGAACTC GGCCGGCAGG CCGTGGCGCA ATCCGCCGAG GCGCGCCAGC GGATGGAGCG CGCTTGCGAG CAGGATGGTC AGCAGGTGCG GTTGCTCGAA GAACGCCTGC TCGCCAGTCG CGGTCGCGCG CAGGAGCTGG ACGAACGCTT GCGCCAGTGC AGGGAGCTGT TGAGTCGCGG CGAGCAGGCC CTGGCCGAGG AACTGGCCGC CTTCGGCCAT CCGCTGCCGG ACGACGGCGC GGCCTGGCTC GCGCGGCGGC AGGGCGAGTG GCAGGACTGG CAGCGGCGGC AGAACCGTCT GCAGCAACTG GAGCGCGAGC GGCTGGAGCA GAGCGCCCTG GTCGAGGCCG CCGAGAAGCA GGCGGCGCTC TGGCAAGGAC GCTGGAGCGA ACTGGGCGAA GCCGGGCGGA CCGCCCCGGC CGAATGCGTC GATGCCCAGG ACGCCCTCGC CGGGGCGGAA GCCGGACTGG ACGCTGCCCG GCGCCGGGCC AACGAACTGG ACGGGCGCCT GCTGTCGCTG GAAGAACAGG TACGGCAGCA GCGCCGCCAT CTGGAGGCCT GCGGCGCGCA CTGGCGGGCG CAATTGGCGC GGAGTCCGTT CGCCGACGAG GCGGCATTCC GCGCGGCGCT GCTCGACGAT GCCCAGCGTG CCGCCCTGCA GGACCTCAAG GCGCGTCTGG AACGGGCGCG GACCGAGGCA CTGGCCCTGC TCGCCGCCGC CGAGGGGCGG TTGGCCGGCC TGCTGGCCGA ACCCCGGACC ACGGCCAGCG GCGAGGAACT GGAGCGACAG GCGCAGGAAC TGGCCGGGCG GCTGCGGAGC CTGGCCGAGG AGCAGGGGGC GATCCGCGCC ACGCTGTCCG CCGACGACGA GCGCCGGCAA GGCCGGCAGG CGCTGTTCGC GGAGATCGAG CGCTGCCGGG CCGAGTACGA TCTCTGGCAG CACCTCAACG GGCTGATCGG CTCGGCCGAC GGCGCCAAGT ACCGCAAGTT CGCCCAGGGC CTGACCCTCG ACCATCTGGT CTGGCTGGCC AACCGCCAAC TGGCGCGTCT GCACGGCCGT TACCAACTGG CACGACGTTC CGACGGCGAA CTGGAGCTGG AGGTCGTCGA CACCTGGCAG GGCGACGCGA CCCGCGACAC CCGCACCCTG TCCGGCGGCG AGAGCTTCCT GGTCAGCCTG GCCCTGGCCC TGGCGCTGTC CGACCTGGTC AGTCACAAGA CCAGCATCGA CTCGCTGTTT CTCGACGAGG GCTTCGGCAC CCTCGACGGC GAGACCCTGG AGGTGGCCCT GGACGCCCTG GACAGCCTCA ACGCCAGCGG CAAGACCATC GGCGTGATCA GCCACGTCGA AGCGCTCAAG GAGCGCATCC CGGTGCAGCT CAGGGTGAGC AAGGGCGTGG GGATGGGCTA CAGCGCCCTG GAAAGGCGCT TCGCCCTGTC CTGA
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Protein sequence | MKILSLRLKN LNSLKGEWKI DFREAPFRDN GLFAITGPTG AGKTTLLDAI CLALYHRTPR MDRLSKESNE LMTRHTAECL AEVEFEVKGR GYRAFWSQRR ARDRADGALQ MPRVELAAAD GSILADKVGD KLARIEALTG LDFARFTRSM LLAQGGFAAF LEADAKSRAE LLEQLTGTDI YGRISQRVFE HAREAKVALE RLQERAAGVE LLDDGERRAL EERAAVLAAE EAPLLARQGE LQARRQWRAE LEQAELRCRE AGEASRRAGL ALAEAAPQLA RLAAGEPAAA LLPAHRDWQQ ACQQLEQGER NLTQIRAERR QAGEAVGLHL WQAGQFARRI AVAAQEQARR LHSQHRQLAE QLAEQPRYAE LGERLGAWRE RFECHRQWQE EIAALQDRQR NEQAALAELG ERQRQAQEHL RRRQAELDSA CAAERQARES LDTLLQGEPE SALREHWRQA QSRRNLLQQL EQNARQRGSG EARLAAIDAE LADGRRRHGE QQARLELLRQ RYRDSQALVA ARKKLLEQER RILDLEAQRS QLQPGEPCPL CGSREHPAVD TYRALDLSAG ERDLQAAEAE LEALLREGEA ARDALAVLDA ELGALRRRRE QDGDELRRQR EQWRQLCAEL GTEPIDLAAI RDALDERLAA FEGRLQQLEL GRQAVAQSAE ARQRMERACE QDGQQVRLLE ERLLASRGRA QELDERLRQC RELLSRGEQA LAEELAAFGH PLPDDGAAWL ARRQGEWQDW QRRQNRLQQL ERERLEQSAL VEAAEKQAAL WQGRWSELGE AGRTAPAECV DAQDALAGAE AGLDAARRRA NELDGRLLSL EEQVRQQRRH LEACGAHWRA QLARSPFADE AAFRAALLDD AQRAALQDLK ARLERARTEA LALLAAAEGR LAGLLAEPRT TASGEELERQ AQELAGRLRS LAEEQGAIRA TLSADDERRQ GRQALFAEIE RCRAEYDLWQ HLNGLIGSAD GAKYRKFAQG LTLDHLVWLA NRQLARLHGR YQLARRSDGE LELEVVDTWQ GDATRDTRTL SGGESFLVSL ALALALSDLV SHKTSIDSLF LDEGFGTLDG ETLEVALDAL DSLNASGKTI GVISHVEALK ERIPVQLRVS KGVGMGYSAL ERRFALS
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