| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_11200 |
|---|
| Symbol | |
|---|
| ID | 7760063 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 1068551 |
|---|
| End bp | 1069372 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643804023 |
|---|
| Product | membrane-like protein |
|---|
| Protein accession | YP_002798325 |
|---|
| Protein GI | 226943252 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3336] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00435487 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCTGA GCGGCCTGCT GCTCCTGCTG CTGCCGGCCG GCGCGCAGGC CCACGGACTG
TTCGACGAAG GCCTCGGCCA ATTGCTGGGC GAGCGCCTGC CGGTGCTGCT CGGCGCCGGG
CTGCTGGCCG CCGCCTGGAT CGGCTACGAA GGCGGCTGTC GACACCGTCC GGCGGCGCGG
CGCCGGCGTG CGCTGCTGCA CGGGGGCTTG CTGCTCGCCG CCCTCAGTCT TTTCGGCCCC
CTGGACGAGG CCGCGGAAAG CAGTGCCGCC GCGCACATGG CGCAGCACAT GCTGTTGATG
CTGGCCGTCG CCCCGTTGCT CGCGCTGGCC CGGCCACTGC CGCAGTGGCA CGCCCTGTGC
GGCCCACGCC TGAAGAGCCT GTGGCACGGC CCGCTGCGCC TGGCCCGCCG GCCGCTGGCC
TGCGCGGTGC TGCACGGCGC GCTGATCTGG ATCTGGCATG CGCCGGGAGC CTACCGGCTG
GCGCTGGACA ACCTCTGGTG GCACTTCTTC GAGCATGCCT GCTTCCTGTT CAGCGCCTGG
CTGTTCTGGT GGTCGGTGCT GCACGCCGGG CCGCGACAGC AGGGCCAGGC GCTGCTGGCC
CTGCTGCTGA CCAGCATGCA CACCGGCCTG CTCGGCGCCT TGCTGAGCTT CGCCCGGGTG
CCGCTCTACC GCGAGGCCGG CGATCTGGGC GACCAGCAAC TGGCCGGCTT GCTGATGTGG
GTGCCGGGCG GCCTGGTCTA CCTGTGCGCC GCCCTCTGGT GCGGGCAGCG CTGGTGGCGA
CGCCTGCTGC GCCGGCTGCC CGGCCATGAC CGGCAGGCTT AG
|
|---|
| Protein sequence | MPLSGLLLLL LPAGAQAHGL FDEGLGQLLG ERLPVLLGAG LLAAAWIGYE GGCRHRPAAR
RRRALLHGGL LLAALSLFGP LDEAAESSAA AHMAQHMLLM LAVAPLLALA RPLPQWHALC
GPRLKSLWHG PLRLARRPLA CAVLHGALIW IWHAPGAYRL ALDNLWWHFF EHACFLFSAW
LFWWSVLHAG PRQQGQALLA LLLTSMHTGL LGALLSFARV PLYREAGDLG DQQLAGLLMW
VPGGLVYLCA ALWCGQRWWR RLLRRLPGHD RQA
|
|---|
| |