Gene Avin_10580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_10580 
Symbol 
ID7760002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1001859 
End bp1002548 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content67% 
IMG OID643803962 
ProductResponse regulator 
Protein accessionYP_002798264 
Protein GI226943191 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAA CCCCGACCAT CCTGCTGGTG GAGGACGACC CGCAGATCCG CGAACTGGTG 
GCCGCCACCC TGGAAGGCGA AGGCTACACC ATCATCGAGG CCGGTACCGC CGCCCAGGGC
GCGGTGGAAG CCGGCGCCCG CAAGCCGGAC CTGCTGATCC TCGACCTGGG CCTGCCGGAC
CGCAACGGCA TCAACTTCAT CCGCGACTAC CGGATCTGGT CCGCGGTGCC CATCCTGGTG
CTCTCCGCCC GCTCCCAGGA AATCAGCAAG GTCACCGCCC TGGATGCCGG CGCCGACGAC
TACCTGACCA AGCCCTTCGG GGTTTCCGAG TTGCTGGCGC GGGTGCGTGC CCTGCTGCGC
CGCAACCCTT CGGAGCGGGA ACAACTGGAG CCGATCATCG AGTTCGGCGA GTGCCGGATC
GACTGCGTGC ACCGCGCGGT CACCCGTGCC GGCGAACCCC TGCATCTGAC CGACATCCAG
TACCGCCTGC TGATCCTGCT GGCCTCCAAC CCCGGCCGGG TGCTCACCCA CCGGCAACTG
CTGCTGCAGA TCTGGGGCAG CCACGCGCTG GAAAACAATC AGTACCTGCG GATCTACGTG
GGCCATCTGC GGCAGAAGAT CGAGCGTATC CCGGCCCAGC CGCGGCACAT CATCACCGAG
ATCGGCGTCG GCTACCGCTT CGAGCCCTGA
 
Protein sequence
MSETPTILLV EDDPQIRELV AATLEGEGYT IIEAGTAAQG AVEAGARKPD LLILDLGLPD 
RNGINFIRDY RIWSAVPILV LSARSQEISK VTALDAGADD YLTKPFGVSE LLARVRALLR
RNPSEREQLE PIIEFGECRI DCVHRAVTRA GEPLHLTDIQ YRLLILLASN PGRVLTHRQL
LLQIWGSHAL ENNQYLRIYV GHLRQKIERI PAQPRHIITE IGVGYRFEP