Gene Avin_08450 details

Gene Information

• Locus tag: Avin_08450
• Symbol: lipB
• ID: 7759799
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 802331
• End bp: 802987
• Gene Length: 657 bp
• Protein Length: 218 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 643803763
• Product: lipoate-protein ligase B
• Protein accession: YP_002798065
• Protein GI: 226942992
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0321] Lipoate-protein ligase B
• TIGRFAM ID: [TIGR00214] lipoate-protein ligase B

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.699386
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGGCAG TGATCGGTGT CCGCGAACTG GGCCTGCTCG ACTACCTGCC GGCCTGGCAG 
GCGATGCAGC GCTTCACCGG CCAGCGGGGG GCGCAGACGC CCGACGAACT CTGGCTGCTC 
GAGCATCCCC CGGTGTTCAC CCAGGGCCAG GCCGGCAAGG CCGAGCACCT GCTGTTCCCC 
GGCGACATCC CGGTGGTGCA GGTGGACCGC GGCGGCCAGG TGACCTACCA CGGCCCCGGC 
CAGTTGGTCG GCTACCTGCT GCTGGACGTG CGCCGTTCGG GGATGGGCGT GCGCGAGCTG 
GTCAGCCGCA TCGAGCGCAG CCTGATCGAG CTGCTCGCCG GCTACGATGT GGAGGCCCAT 
GCCAGGCCGG ACGCACCGGG GGTCTATGTC GGCGAGATGA AGATCGCCTC CCTCGGCCTG 
CGCATCCGCA ACGGCCGCTC CTTCCATGGA CTGGCGCTGA ACGTGGACAT GGACCTGGCG 
CCCTTCCAGC GCATCAACCC CTGCGGCTAT GCCGGCATGC TCATGACACA ACTCAAGGAT 
CAGGCCCGCG GGCCGGTCGA ATTCGCCGAG GTGCGCAGCC GCCTGCGTGC ACAGCTCGCT 
GCGCAGCTCG GTTACGCTGA AGCGAAGACC CTTACGGGCG GGATCGAAAG CATATGA 

 

Protein sequence

MTAVIGVREL GLLDYLPAWQ AMQRFTGQRG AQTPDELWLL EHPPVFTQGQ AGKAEHLLFP 
GDIPVVQVDR GGQVTYHGPG QLVGYLLLDV RRSGMGVREL VSRIERSLIE LLAGYDVEAH 
ARPDAPGVYV GEMKIASLGL RIRNGRSFHG LALNVDMDLA PFQRINPCGY AGMLMTQLKD 
QARGPVEFAE VRSRLRAQLA AQLGYAEAKT LTGGIESI