| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_08380 |
|---|
| Symbol | |
|---|
| ID | 7759792 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 794816 |
|---|
| End bp | 795283 |
|---|
| Gene Length | 468 bp |
|---|
| Protein Length | 155 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643803756 |
|---|
| Product | rRNA large subunit methyltransferase |
|---|
| Protein accession | YP_002798058 |
|---|
| Protein GI | 226942985 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1576] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0699075 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGTTTGC GCCTGATCGC CGTGGGTTCG CGCATGCCGC GTTGGGTGGA GGAGGGCTGG
CACGAGTATG CCAGGCGCCT GCCGCCCGAG CTGGCCCTCG AACTGCTGGA AATCCCCCTG
CACACGCGGA GCAAGAATGC CGACGTGGCC CGCCTGATCC GCCAGGAGGG GGAGGCCATG
CTGGGCAAGG TGCAGCCGGG CGAGCGTATC GTCACCCTGG AAGTGGCCGG CAAGTCCTGG
AGCACCGAGC AACTGGCCGC CGAGCTGGAG CGCTGGCGGC TCGACGCGCG CACCGTCAAT
CTCATGGTCG GCGGCCCGGA AGGCCTGGCC CCGGAGGTCT GCGCGCGCAG CGAGCAGCGC
TGGTCGCTGT CGCCGCTGAC CCTGCCGCAT CCCCTGGTCC GCATCCTCAT CGGCGAGCAG
CTCTATCGCG CCTGGACCCT GCTGTCCGGG CATCCGTATC ACAAATGA
|
|---|
| Protein sequence | MRLRLIAVGS RMPRWVEEGW HEYARRLPPE LALELLEIPL HTRSKNADVA RLIRQEGEAM
LGKVQPGERI VTLEVAGKSW STEQLAAELE RWRLDARTVN LMVGGPEGLA PEVCARSEQR
WSLSPLTLPH PLVRILIGEQ LYRAWTLLSG HPYHK
|
|---|
| |