| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_08200 |
|---|
| Symbol | |
|---|
| ID | 7759774 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 775257 |
|---|
| End bp | 777560 |
|---|
| Gene Length | 2304 bp |
|---|
| Protein Length | 767 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643803738 |
|---|
| Product | TonB-dependent siderophore receptor |
|---|
| Protein accession | YP_002798040 |
|---|
| Protein GI | 226942967 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
|---|
| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTGCTGT TGAGCGGTAC CAGCCTGATA CCGGATTCGA TAGTTCTGGC CGACACCGAT
AACGATCCGA TCCCGGTCCA GAGCGCACAG GCCGGCGAAG AGCCGCGCCT GGGGGCCGTT
ACCGTCAATG CCCGGCGCCG CGAGGAAAGC GCCCAGGACG TGCCGACGCC GATCAGCGTG
CTGGATGCGC AGACCCTGGA GAATCAGCGT ATCTACCGCG TGCAGGATCT GCAGCAGTTG
GTGCCCAGCG TGAATGTCTC TTACGTTCAC GCGCGTCAGT CGAGCATCTC GATCCGCGGC
CTGGGCAACA ACCCGGCCAG CGACGGGCTG GAGCCCGCGG TCGGAACCTA CCTGGACAAC
GTCTACCTGG GGCGCCCCGG CATGGCCGTG TTCGACCTGC TGGACGTGGA ACAGATCGAC
GTGCTGCGCG GTCCGCAGGG CACGCTGTTC GGCAAGAACA CCACGGCGGG GGTGGTCAAC
ATCAGCACCC GCAAGCCGAC TTTCCACCCT GAGCGCAGCG TCGAGATCTC CGGTGGCGAG
GACGGTTATT TCCAGACCAA GGGCAGCGTC TCGGGCCCCT TGAGCGACAC GCTGGCGGGG
CGTCTGTCGG CCTACCGCAC CCGCGACGAC GGCTACGTGA AGAACATTCA CGACGGCGAC
GACCTCAACG GTGGTGCGCG CCAGGGCTTC CGCAGCCAGT TGCTCTGGCG GCCGAGCGAA
ACCTTCAACC TGCGCTGGAT CGGCGAATAC AACGAGGAGG ACTCCGACAA CGGCATCCTC
ACCCTCTACA GCACCGGCCC GACCATCGAT GGCGTCAACC GCTATGAGCA GCGTGCGGCG
GCGGCGGGCG CCAGGCTGGT CAAGGCCAGG GAGCGCAAGG TCGACCTCGA TTCCGATCAA
CAGGTCACCG TGTTCCAGGG CGGCACTTCC CTGGAGGCCA ACTGGACCCT GCCCAACGAC
TTCACCCTGA CTTCGATCAG CGCCTACCGC TGGTGGGATT TCACCCCGCG CAACGACGAC
GGACTGAACG TTTCGGCTCA GATCAACGCC GGCGTCGAAG TGCGTGACAA ACAGTATTCC
CAGGAATTCC GCCTGGCCTC GCCCTTGGGG GGCGCTTTCG ACTACGTACT GGGCGCCTAT
TGGTTCAAGC AGGACCTGGA CAACAAGTCA TTCAACTATT ACGGCCCGCT GGCCGACATC
TGGAATGGCA CCGTGACCGG CGCGCTGGCC AACGTCACCA GCATCGGCGA CGGCCACATC
GAGACCGACA GCTATGCGCT GTTCGCCCAG GGCAACTGGC ACCTGACCCC CAGGCTGGAT
CTGACCATCG GCATCCGTGG CACCTATGAG GAGAAGGATT CCTGGGTAAG GCGCGACGCT
CCACGCGGCG GCGACGCGGT GAGCGGGGCG GCGGCCAGCC AGCGCAACAA CCGGGCCGGG
GCCTACGATT CCGGCGATCT CAGCCAATAC ACCTTCAGCC CGTCCGGCCT GCTCAGCCTG
AGCTATCGCT TCAACGACCG CTGGCTCGGC TATGCGTCCC TGTCTCATGG CGAGAAATCC
GGCGGCGTCA ACCTGACCGT GGGCAGTGCG CCCAGCGCCG GTGCGGATTC GCTGCTGGTG
GGCACGGAGC GGGTCAACAA CGCCGAGCTG GGTTTCAAGA GCACGTTGCT CGATGGCACC
TTGCTGTTCA ACGCCAACGT CTTCTGGACC CAGGTGCACG GTTATCAGGC CAATGCCTAC
GACCATGCGA CGCGCACTTC GTACCTGACC AACGCGGGCG ATGTGCGTTC GCGTGGTCTC
GAAGTGGAAA CCACCTGGCG ACCGCTGCGG GGGCTCACGA TCAACGCCAA TGGCTCGTAC
AACGACGTCC GTTACACCAA GTACGAGGAC GCGCCCTGTC CGCCTGAAGT GGGCTTCCGG
AGCGGAGCCC CGGCTTCCTG CGATCTCACC GGTCATCGCG TGGTCGGCGC CTCGCGCTGG
ATCGCCAACC TCAATGGTCA CTATCAGTGG ACGCTGAACA ATGGCCTGCA ACCCTACCTG
AACGCCAGCT ATGCCTTCCG CTACCGGGCG GTCGGAACCA TCGACGACTC CGAGCACGGC
CAGATTCCCA GCTATGCGGT GGTCAACCTG TCCAGCGGCC TGCGCGGCGA TTTCGGCGAT
GGCCAGTGGG ATGTCTCGCT GTGGCTGAAG AACGCCTTCG ACAAGACCTA TTACACCAGC
CTGTGGAATT CCGCCAACGG CGGCTACGCC GGCGTGCTCG GCACGCCGCG CACCTTGGGC
CTGACCGCCC GCTACGATTT CTGA
|
|---|
| Protein sequence | MLLLSGTSLI PDSIVLADTD NDPIPVQSAQ AGEEPRLGAV TVNARRREES AQDVPTPISV
LDAQTLENQR IYRVQDLQQL VPSVNVSYVH ARQSSISIRG LGNNPASDGL EPAVGTYLDN
VYLGRPGMAV FDLLDVEQID VLRGPQGTLF GKNTTAGVVN ISTRKPTFHP ERSVEISGGE
DGYFQTKGSV SGPLSDTLAG RLSAYRTRDD GYVKNIHDGD DLNGGARQGF RSQLLWRPSE
TFNLRWIGEY NEEDSDNGIL TLYSTGPTID GVNRYEQRAA AAGARLVKAR ERKVDLDSDQ
QVTVFQGGTS LEANWTLPND FTLTSISAYR WWDFTPRNDD GLNVSAQINA GVEVRDKQYS
QEFRLASPLG GAFDYVLGAY WFKQDLDNKS FNYYGPLADI WNGTVTGALA NVTSIGDGHI
ETDSYALFAQ GNWHLTPRLD LTIGIRGTYE EKDSWVRRDA PRGGDAVSGA AASQRNNRAG
AYDSGDLSQY TFSPSGLLSL SYRFNDRWLG YASLSHGEKS GGVNLTVGSA PSAGADSLLV
GTERVNNAEL GFKSTLLDGT LLFNANVFWT QVHGYQANAY DHATRTSYLT NAGDVRSRGL
EVETTWRPLR GLTINANGSY NDVRYTKYED APCPPEVGFR SGAPASCDLT GHRVVGASRW
IANLNGHYQW TLNNGLQPYL NASYAFRYRA VGTIDDSEHG QIPSYAVVNL SSGLRGDFGD
GQWDVSLWLK NAFDKTYYTS LWNSANGGYA GVLGTPRTLG LTARYDF
|
|---|
| |