| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_08030 |
|---|
| Symbol | mpl |
|---|
| ID | 7759757 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 759672 |
|---|
| End bp | 761024 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643803721 |
|---|
| Product | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase |
|---|
| Protein accession | YP_002798023 |
|---|
| Protein GI | 226942950 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
|---|
| TIGRFAM ID | [TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0916277 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACATCC ACATACTCGG CATCTGCGGC ACTTTCATGG GCTCGCTGGC GGTTCTGGCG
AAGGAACTGG GCCATCGTGT CACCGGCTCC GACGCCAACG TCTATCCGCC CATGAGTACC
CAGTTGGAGG CCCAGGGTAT CGAGCTCATG CAGGGCTATG CGCCCGGCCA TCTGCAGCCG
GCGCCGGACC TGGTGGTGAT CGGCAATGCC CTGTCGCGCG GCAACCCGGC GGTGGAGTAC
GTGCTGAACC AGGGCCTGCC CTATGTCTCC GGCCCGCAGT GGCTGGCCGA CCATGTGCTG
CAGGGGCGCT GGGTGCTGGC GGTGGCCGGC ACCCACGGCA AGACCACCAC CACCAGCATG
CTGGCCTGGG TACTGGAACA GGCCGGCATG AGCCCGGGCT TCCTGATCGG CGGGGTGCCG
CAGAACTTCG GCGTCTCGGC GCGCCTGGGC GGCAGCGACT TCTTCGTGGT CGAGGCCGAC
GAGTACGACA GCGCCTTCTT CGACAAGCGC TCGAAGTTCG TCCACTACCG GCCGCGGACC
GCGATCCTCA ACAACCTGGA ATTCGACCAT GCGGACATTT TCCCGGATCT GGCGGCCATC
GAGCGGCAAT TCCATCATCT GGTGCGGACC ATCCCGAGCC AGGGGCTGAT CGTCTACCCG
ACCACCGAAG AGGCCATCGA ACGGATGCTC GCCATGGGCC GCTGGACCCC GGTGCAGACC
ACCGGCGAGG GCGGCCAGTG GCAGGCGCGC CTGCTGGTCG AGGACGGTTC GCGCTTCGAG
GTGCGCTTCG AGGGCGCGCC GCAGGGGGTG GTCGACTGGG AGCTGAGCGG CCGGCACAAC
GTCGCCAATG CCCTGGCCGC CCTGGCCGCG GCGCGCCACG TGGGTGTGGC GGCGGAGCAG
GGCATCGCCG CGCTGGGCGG CTTCCGTAAC GTCAAGCGGC GGATGGAGAA GGTCGCCGAG
GTGCGCGGCG TGACCCTTTA CGACGACTTC GCCCACCATC CGACGGCCAT CGCCACCACC
CTCGACGGCC TGCGCAAGCG TGTCGGCGAG GCGCCGATCA TCGCGGTGAT CGAGCCGCGC
TCCAACTCCA TGAAGCTCGG CGCCCACCGC GACGGTCTGC CGGGGGCGGT GGCTCAGGCC
GACCAGGTGG TCTGGTACGC GCCACCGAAC CTCGGCTGGG ACCTGGCCGC CACCGCCGCC
GCCTGTCCGG TGCCGGCAGT GGTCTGCGAA TCGCTGGAGG CGATCATCGC TCGGGTCGTG
AGCCAGGCGG CGCCTGGCAC CCAGGTGGTG ATCATGAGCA ACGGCGGTTT CGGCGGTCTG
CACGGCAAGC TGGCCAGGGC TCTGGAGGAC TGA
|
|---|
| Protein sequence | MHIHILGICG TFMGSLAVLA KELGHRVTGS DANVYPPMST QLEAQGIELM QGYAPGHLQP
APDLVVIGNA LSRGNPAVEY VLNQGLPYVS GPQWLADHVL QGRWVLAVAG THGKTTTTSM
LAWVLEQAGM SPGFLIGGVP QNFGVSARLG GSDFFVVEAD EYDSAFFDKR SKFVHYRPRT
AILNNLEFDH ADIFPDLAAI ERQFHHLVRT IPSQGLIVYP TTEEAIERML AMGRWTPVQT
TGEGGQWQAR LLVEDGSRFE VRFEGAPQGV VDWELSGRHN VANALAALAA ARHVGVAAEQ
GIAALGGFRN VKRRMEKVAE VRGVTLYDDF AHHPTAIATT LDGLRKRVGE APIIAVIEPR
SNSMKLGAHR DGLPGAVAQA DQVVWYAPPN LGWDLAATAA ACPVPAVVCE SLEAIIARVV
SQAAPGTQVV IMSNGGFGGL HGKLARALED
|
|---|
| |