| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_08020 |
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| Symbol | |
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| ID | 7759756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | + |
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| Start bp | 757694 |
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| End bp | 759589 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643803720 |
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| Product | Sigma54-dependent transcriptional activator |
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| Protein accession | YP_002798022 |
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| Protein GI | 226942949 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.288355 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTCGCC ATGTTCATCA GGTGAAAACC CTGGCCGAGG GAAAGGCCAT CGGACCGGCC
AACGATCCCT CGATCGCCCG CTCCTGGCTG CGCTGCCTGG AGCAGCACCA GCTCGACCCG
TCGCAGCCGC TGACGCCCAG CGTGCTGGAG CACGGTCACC TGCTGGAGCG CCGCGAGCGC
CTGCAGCGGG TGCTGGAGAT CGCCAGCGGC GAAATGAACA ACCTCCACCT GCAACTGGCC
GGCAGCGCCC ACGCCGTGCT GCTGACCGAT GCCCGCGGGG TGATCCTCAA CCGCGTCAGC
GCCGCCGCCG AGCAGTCGAC CTTCGAGCAC GCCGGACTCT GGCTGGGCGC CGACTGGAGC
GAGGCCTGCG AGGGCACCAA CGGCATCGGC ACCTGCCTAG TCGAGCGCCA GCCGCTGACC
ATCCAGCAGG AGGAACACTT CCGCAGTTGC CACACCGGCC TGACCTGCTC GGCCAGCCCG
GTGTTCGACC CGCACGGCGA ACTGCTCGCG GTGCTCGACG TCTCCACGCT GCAGGACAAC
GTGTCGCGGC AGAGCCAGTT CCACACCATG GCGCTGGTCA ACCTCTCGGC CAAGGTGATC
GAGAGCTGCT ATTTCCTGCG CCGCTTCGAG AACGACTGGC TGCTGCGCTT CCACCTGCAG
GCCGAATACG TCGGGCTGTT CAGCGAGGGG CTGTTGGCCT TCGACGGCGA AGGGCGGGTG
CTGGCGGTCA ACCAGACCGC CATCAACCTG CTCGGCGGCA GCCGCCGCGA ACTGCTCGGC
CAGTCGGTCG AATCCCTTTT CGCCTCGCGC CTGGACGATT TGCTGGCTCT GGCCAGCGAG
CAGCCGAGCG CCAGTTGGCC GCTGCGCGCC CAGGATGGCC GGATGCTCTT CGCCCTGCTA
CGCGGCCGGG CGCGCCGTCC GGTGGGCGCG GTGCCGGTGG TGGAGGCCGC CTCGCCCGCG
GTGCCGGCGA GCATCTGCCT GGGCGATGCC GCGTTGCAAC AGGCCTTCCG TCGTGCGCTG
CGGGTGATCG AGCGCGACGT GCCGCTGTTG CTGCACGGCG AGACGGGTTC CGGCAAGGAG
GCCTTCGCCA AGGCCGTGCA CCAGGCCGGC AGCCGTGCCG AGCGGCCGTT CGTCGCGCTG
AACTGCGCGG CGATCCCGGA GAACCTGATC GAGAGCGAGC TGTTCGGCTA CCGTGGCGGC
AGTTTCACCG GCGCGCGCAA GGAGGGCATG CGCGGCAAGT TGCAGCAGGC CGACGGCGGC
ACCCTGTTCC TCGACGAGAT CGGCGACATG CCGCTGGCGC TGCAGACCCG CCTGTTGCGC
GTGCTCGACG AGCGCCAGGT GGTACCCATC GGCGGCGAGC CGGAGCCGGT GGACGTTCGG
GTGATCAGCG CCACCCACCG CGACCTGCGC GAGCGGGTCG CCGCCGGGCT GTTCCGCGAG
GACCTGTTCT ACCGCCTGGA CGGCCTGGCG GTGACCCTGC CGCCGCTGCG CGAGCGGAGC
GACAGGGGCG AACTGATCGA GCACCTGCTC GCCCGCGAGG CGCGCGGCGA GGCGATCCGG
CTCGAGCCGG CGGCGCGCCA GGCACTGCTC GCCTATGCCT GGCCGGGCAA CGTGCGCCAG
TTGCGCAGCG TGCTGCGCGC CCAGGTGGCG CTCTGCGAGG ATGGCCTGAT CCGTCTGGCC
GATCTGCCGG CGGATCTGCG CCTGGCCCCG GTACTGCCGG CACCGGCGCC GCTGGAAACC
AACGGCCTCC TGGAGCAGGC CGAACGCGAT GCCCTGCTGG CCGCCCTCGA AGCCAATCAC
TGGCACGTGA GCCGTACCGC CGAGCAACTC GGCATCAGCC GCAACACCCT CTACCGCAAG
CTGCAGCGCC ACGGCATCCG CCGCGAAGGC GACTGA
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| Protein sequence | MLRHVHQVKT LAEGKAIGPA NDPSIARSWL RCLEQHQLDP SQPLTPSVLE HGHLLERRER
LQRVLEIASG EMNNLHLQLA GSAHAVLLTD ARGVILNRVS AAAEQSTFEH AGLWLGADWS
EACEGTNGIG TCLVERQPLT IQQEEHFRSC HTGLTCSASP VFDPHGELLA VLDVSTLQDN
VSRQSQFHTM ALVNLSAKVI ESCYFLRRFE NDWLLRFHLQ AEYVGLFSEG LLAFDGEGRV
LAVNQTAINL LGGSRRELLG QSVESLFASR LDDLLALASE QPSASWPLRA QDGRMLFALL
RGRARRPVGA VPVVEAASPA VPASICLGDA ALQQAFRRAL RVIERDVPLL LHGETGSGKE
AFAKAVHQAG SRAERPFVAL NCAAIPENLI ESELFGYRGG SFTGARKEGM RGKLQQADGG
TLFLDEIGDM PLALQTRLLR VLDERQVVPI GGEPEPVDVR VISATHRDLR ERVAAGLFRE
DLFYRLDGLA VTLPPLRERS DRGELIEHLL AREARGEAIR LEPAARQALL AYAWPGNVRQ
LRSVLRAQVA LCEDGLIRLA DLPADLRLAP VLPAPAPLET NGLLEQAERD ALLAALEANH
WHVSRTAEQL GISRNTLYRK LQRHGIRREG D
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