| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_07880 |
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| Symbol | ispA-1 |
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| ID | 7759742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 747272 |
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| End bp | 748159 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 643803706 |
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| Product | geranyltranstransferase |
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| Protein accession | YP_002798008 |
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| Protein GI | 226942935 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.408699 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGCGG CCTACCAGAA GCAGTGCCAG GCCCGCGTCG ACGCCGCCCT GGAAGCCCTC
CTGCAGCCCC CGCGCGCCGA ACTGCAGCGG CTCTACCAGG CGATGCGCTA CAGCGTCGTC
AACGGCGGCA AGCGGGTCCG CCCGCTGCTG GTCTACGCCG CCTGCGAGGC CCTCGGCGGC
ACGCCGGAGC GGGCCGAGGG CGCCGCCTGC GCGGTGGAGC TGATCCATGC CTACTCGCTG
GTTCACGACG ACCTGCCGGC GATGGACGAC GACGACCTGC GCCGCGGCCA GCCGACCACC
CACCGGGCCT TCGACGAGGC CTGCGCGATC CTCGCCGGCG ACGGCCTGCA GGCGCTGGCC
TTCGAGGTGC TCACCGATCC CCGGCGCAAT CCCCGGGATG CCGGGTTGCG CCTGGAGATG
TCGCGCACCC TGGCCCGGGC CGCCGGCCCG GCCGGCATGG TCGGCGGCCA GGCCATCGAC
CTCGAGGCGG TCGGCCGCCG GCTCGACCGC GACGCCCTGG AAACCATGCA CCGGCACAAG
ACCGGCGCAC TGATCGAAGC CAGCGTGCGC CTCGGCGCCC TGGCCAGCGG CCGCGCCGAC
GAGACCGACC TCGCCGCGCT GGCCGTCTAC GCGCGGGCCA TCGGCCTGGC CTTCCAGGTC
CAGGACGACA TCCTCGACGT GGAAAGCGAC ACCGCCACCC TCGGCAAGAC CCAGGGCAAG
GACCAGGCCA ACGACAAGCC CACCTACCCC GCGCTGCTCG GCCTCGAGGC CGCCAAGGCC
TATGCCCTGG CCCTGCGCGA CCAGGCCCTG GGCGCCCTCG AGGGCTTCGA CGCCGGGGCC
GATCCCCTGC GCGCGCTCGC CCGCTACATC GTCGAGCGGC GCCACTGA
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| Protein sequence | MIAAYQKQCQ ARVDAALEAL LQPPRAELQR LYQAMRYSVV NGGKRVRPLL VYAACEALGG
TPERAEGAAC AVELIHAYSL VHDDLPAMDD DDLRRGQPTT HRAFDEACAI LAGDGLQALA
FEVLTDPRRN PRDAGLRLEM SRTLARAAGP AGMVGGQAID LEAVGRRLDR DALETMHRHK
TGALIEASVR LGALASGRAD ETDLAALAVY ARAIGLAFQV QDDILDVESD TATLGKTQGK
DQANDKPTYP ALLGLEAAKA YALALRDQAL GALEGFDAGA DPLRALARYI VERRH
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