Gene Avin_07860 details

Gene Information

• Locus tag: Avin_07860
• Symbol: btuB
• ID: 7759740
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: -
• Start bp: 743256
• End bp: 745148
• Gene Length: 1893 bp
• Protein Length: 630 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 643803704
• Product: TonB-dependent vitamin B12 receptor
• Protein accession: YP_002798006
• Protein GI: 226942933
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG4206] Outer membrane cobalamin receptor protein
• TIGRFAM ID: [TIGR01779] TonB-dependent vitamin B12 receptor

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.239557
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCCCCC TCACCCTGGC CGCCGCCCTG CTGCCCGCGC CCCTTCTCGC CGCCGACTCG 
AGCGAGGCTC CGGCGACCTT CCGCTTGCCT ACCCAGAGCG TCGTCTCGCG CCAGTCGACC 
GGGTCCATCG AGCCGGCGAG CGCCGCCGCC ACGGTATTCA CCCACGACGA TATCGAGCGC 
CTGCAGGTGC AGAGCGTGCC GGAGCTGCTG AACCGGGTTC CCGGCGTGGT CATGGCCCAG 
GGCGGCGGAC GCGGAGCGCT GAGCGGCGCC TTCATTCGCG GCGCCAATCC CGGCCAGACC 
CTGGTGCTGG TCGACGGGGT ACGCATCAAC AGCGCGGCCA GCGGCGTGGC CCGCCTGGAG 
TTCCTCGACC CCGGACGCAT CGAGCGGATC GAGGTGATCC GAGGTCCCCT GGCCAGTCAG 
TACGGCGCCG ATGCCATCGG CGGGCTGATC CGCATCTTCA CCCGTCGCGG AGAGCCCGGC 
CTGCGGCCGC GCCTGCGTCT GGCGGTCGGT AACCGGGGCG CCTTCGAACG CGAGTTCGAC 
CTCGCCGGCA GCGACGAGCG GACTCGCTTC GATCTGGGCG CCAGCCAGGT GGAAAGCCAG 
GGCTTCGACC GCAGCTCCGA CAATCGCGGG CGCGACGCCG ATCACGACGG CTTCCGCAGC 
CGCGCCCTCG ACCTGACCCT GGAGCACCGC TTCGCCGACA ACCTCCAGGC CGGCCTGAAC 
CTGCTCGACC AGCGCGGCGA GAGCGAACTG GACGACGTCT ACAGCTTCAG GCCCGGCGAT 
CCCTACGAGC GCTTCGTCGT CAGCAGTGTC GCCGCCCACC TCGAGATCCG CCCCAGCGAG 
GCCTGGACCA GCCGAATCGA AACCGGCCAC TTCGAGAACA GGAGCGAGAA CCGCGACGAT 
CACAACCTCG TCAACAACCA CAGCTTCGAC ACCTACCGGG ACTCACTGGC CTGGTTCAAT 
ACCCTGAGGC TCGACGAGCG CCGGCAGTTG CTGCTCGGTG CCGAGTGGTA CGAAGAACGC 
CTGCACGGCG AACTCGACTA CGACGAAACC CGGCGCTGGA ACCGCGCGGC CTTCGTCCGC 
CACAGCTACC GGGGCGAAGG TCTTGGCGTC GAGATCGGCC TGCGCCACGA CGACAACCAA 
CGCTTCGGCA GCGAGGAAAG CTGGAGCGCG GCACTGACCC TGGACCTGGC GCGCGCTACC 
GAGCTGATCC TGAGTTATGC CGAGGGCTTC CATGCACCGA GTTTCAGCGA ACTCTACTTT 
CCGCCCACCC CGCTCTACGG CGGCAATCCC GACCTCGCGC CGGAGCGTTC GAAGAGTTAC 
GAGATCCAGT TGCGCGGCGA ACACCGCGGA ACCCACTGGA GCCTGTCCGC CTACCGTACC 
GAGGTGGACG ACCTGATCGT GGAGACCAGC CGGCCGGGCA ACCTCTCCGA CCGCCTGGAG 
AATATCGACC GGGCGCGCCT GCAGGGGCTG GAGCTGGCCC TGTCGCGCGA CATTCTCGGC 
TGGCGGGCGG CACTGGCCGC CAGCCTGGTC GACCCGCGCG ACCGCGACAG CGGCCACACC 
CTGCCGCGCC GGGCCAGGCG CAACCTGAGC CTGGACCTCG ACCGCCGCTT CGGCGCCTTC 
TCCGCCGGCA TCGGCTGGCA GGCGGTATCC AGCCGCTACG AGGACGACGC CAACGAGCAC 
GGGATAGCCG GGTACGCCCT GCTCGGCCTG CGCGGTAGCT GGCAGATGAG CGAGGCGCTG 
AAGTGGCAGG TCAAGATCGA CAACCTGCTG GACAAGGAGT ATTCGCAGGT GCTCTACAAC 
CGGCCGGATA CTCCCTTCTA CACCAGCTTC GGCCTGCACG AATTCCGCCA GGACGGCCGC 
AGCGCCCTGC TCTCGCTGAC CTGGACGCCG TAG 

 

Protein sequence

MAPLTLAAAL LPAPLLAADS SEAPATFRLP TQSVVSRQST GSIEPASAAA TVFTHDDIER 
LQVQSVPELL NRVPGVVMAQ GGGRGALSGA FIRGANPGQT LVLVDGVRIN SAASGVARLE 
FLDPGRIERI EVIRGPLASQ YGADAIGGLI RIFTRRGEPG LRPRLRLAVG NRGAFEREFD 
LAGSDERTRF DLGASQVESQ GFDRSSDNRG RDADHDGFRS RALDLTLEHR FADNLQAGLN 
LLDQRGESEL DDVYSFRPGD PYERFVVSSV AAHLEIRPSE AWTSRIETGH FENRSENRDD 
HNLVNNHSFD TYRDSLAWFN TLRLDERRQL LLGAEWYEER LHGELDYDET RRWNRAAFVR 
HSYRGEGLGV EIGLRHDDNQ RFGSEESWSA ALTLDLARAT ELILSYAEGF HAPSFSELYF 
PPTPLYGGNP DLAPERSKSY EIQLRGEHRG THWSLSAYRT EVDDLIVETS RPGNLSDRLE 
NIDRARLQGL ELALSRDILG WRAALAASLV DPRDRDSGHT LPRRARRNLS LDLDRRFGAF 
SAGIGWQAVS SRYEDDANEH GIAGYALLGL RGSWQMSEAL KWQVKIDNLL DKEYSQVLYN 
RPDTPFYTSF GLHEFRQDGR SALLSLTWTP