Gene Avin_07800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_07800 
SymboltrmA 
ID7759732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand- 
Start bp737146 
End bp738231 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content69% 
IMG OID643803699 
ProducttRNA (uracil-5-)-methyltransferase 
Protein accessionYP_002798001 
Protein GI226942928 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 
TIGRFAM ID[TIGR02143] tRNA (uracil-5-)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCTTC CGCATTTCGA CCCCTCGCAC TACGACGCCC AACTGGCCGA CAAGCAGGCG 
CGCCTGAGCG GACTGCTGGC GCCGTTCGCC GCGCCCGAGC CGGAGGTGTT CGACTCACCC 
CGCGAGCACT ATCGCCTGCG CGCCGAATTC CGCCTGTGGC GCGAGGGCGA AGCGCGCCAC 
TATGCGATGT TCGATCCCGG CGACAAGCGC AAGCCCATCC TCCTCGACGA CTTCCCCATC 
GCCAGCGAGC GCATCAACGA TCTGATGCCG CGCCTGAAGG CCGCCTGGGA GAACGCCGCG 
CTGGGCTTCA AGCTGTTTCA GGTGGAATTC CTCACCACCC TGGCCGGCGA CGCGCTGATC 
ACCCTGTGCT ACCACCGCCC GCTGGACACC TTCTGGCAGA CCGCCGCCGA GCGGCTCGCC 
GCGGAACTGG GGGTGAGCAT CGTCGGCCGC TCGCGGGGCC AGCGCCTGGT CGTCGGCCGC 
GACTACGTGG AAGAGGAACT GGAAGTGGCC GGGCGGCGTT TCCGCTACCG CCAGCCGGAG 
GGCGCCTTCA CCCAGCCCAA CGGCGTGGTC TGCCGGAAGA TGCTGAACTG GGCCCATGAC 
GTTCTGGGCG AGCGCGACGA CGACCTGCTG GAGCTGTACT GCGGCAACGG CAACTTCACC 
CTGCCGCTGG CGACCCGCGT GCGCCGGGTG CTGGCCACCG AGATCAGCAA GACCTCGGTC 
AACGCCGCGC TGACCAATCT GGAAAGCAAC GGCGTGGACA ACGTGACCCT GGTGCGCCTG 
TCCGCCGAGG AGCTGACCCA GGCGCTCAAC GAGGTGCGGC CGTTCCGCCG GCTGGCCGGC 
GTCGACCTGA AGGGCTACGA CTTCGGCAGC CTGTTCGTCG ATCCGCCGCG CGCCGGCATG 
GACCCGGACA CCTGCGAGCT GGCCCGGCGC TTCGGGCGCA TTCTCTACAT CTCCTGCAAC 
CCGGAAACCC TGGCGGCGAA CATCGCCCGG CTCCACGACA CGCACCGCGT CGTGCGCTGC 
GCGCTGTTCG ACCAGTTCCC CTACACCCAC CACATGGAGT CGGGAGTGCT GCTGGAGCGG 
CGCTGA
 
Protein sequence
MSLPHFDPSH YDAQLADKQA RLSGLLAPFA APEPEVFDSP REHYRLRAEF RLWREGEARH 
YAMFDPGDKR KPILLDDFPI ASERINDLMP RLKAAWENAA LGFKLFQVEF LTTLAGDALI 
TLCYHRPLDT FWQTAAERLA AELGVSIVGR SRGQRLVVGR DYVEEELEVA GRRFRYRQPE 
GAFTQPNGVV CRKMLNWAHD VLGERDDDLL ELYCGNGNFT LPLATRVRRV LATEISKTSV 
NAALTNLESN GVDNVTLVRL SAEELTQALN EVRPFRRLAG VDLKGYDFGS LFVDPPRAGM 
DPDTCELARR FGRILYISCN PETLAANIAR LHDTHRVVRC ALFDQFPYTH HMESGVLLER 
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