Gene Avin_07530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_07530 
SymbolmiaA 
ID7759705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp712027 
End bp712998 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content66% 
IMG OID643803670 
ProducttRNA delta(2)-isopentenylpyrophosphate transferase 
Protein accessionYP_002797974 
Protein GI226942901 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase 
TIGRFAM ID[TIGR00174] tRNA isopentenyltransferase (miaA) 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCACC TGCCTCCCGC CATCTTTCTC ATGGGGCCGA CCGCTTCCGG CAAGACCGAC 
CTGGCGCTGG AGCTGGCGCG GGTCCTGCCG TGCGAGCTGA TCAGCGTCGA CTCGGCGCTG
GTCTACCGGG GCATGGACAT CGGTACGGCC AAGCCCGCGA AGGCGCTGCT GGCGGAGTTT
CCCCACCGTC TCATCGATAT CCGCGATCCG GCGGAAAGCT ACTCCGCCGC TGAATTCCGC
GACGATGCCC TGGCGGCCAT GGCCGAGATC AGCGCCCGGG GGCGCATCCC CCTGCTGGTA
GGCGGCACCA TGCTGTACTA CAAGGCCCTG CTGGAGGGGC TGGCGGACAT GCCGAGCGCC
GATCCGGCGC TACGCGCGGA GCTGGAGGCG CGGGGCGCCG CGGAAGGTTG GGCGGCCCTG
CACCGGGAAC TGGCGACGGT CGATCCGGAG TCGGCGGCGC GCATCCATCC CAACGATCCC
CAGCGTCTGG TGCGGGCTCT GGAGGTCTAT CGGGTCAGTG GCCTGTCGAT GACGGCCCAC
CGCTTGCGTC AGGTTGCGCA AAATCCTCTA TCCGACAGGT CGGCCGGGGA GCATTTGCCT
TATACTGTCG TCCATCTGGC AATTGCGCCG ACGCAGCGGC AGATTCTGCA CGAGCGGATC
GCCCGGCGGT TCCGCCTGAT GCTGGAACAG GGCTTCGTCG ACGAGGTCGA GCTTCTGTGG
CGGCGCGGCG ATCTGCATGC GAGCCTGCCC TCCATGCGTG CGGTCGGCTA TCGGCAGGTA
TGGGAATATC TGGATGGCCT ACTGACACGG GAGCAGATGG TCGAGCGCGG CATCATCGCG
ACACGCCAAC TGGCCAAGCG GCAGTTCACT TGGTTGCGTA ACTGGACCGA CCTTCACTGG
TTGGACAGTC TGGGGGACGA CAATCTTCAA CGCACCTTGA AATACCTGGA GACGGCCGCC
ATATTGGCCT GA
 
Protein sequence
MSHLPPAIFL MGPTASGKTD LALELARVLP CELISVDSAL VYRGMDIGTA KPAKALLAEF 
PHRLIDIRDP AESYSAAEFR DDALAAMAEI SARGRIPLLV GGTMLYYKAL LEGLADMPSA
DPALRAELEA RGAAEGWAAL HRELATVDPE SAARIHPNDP QRLVRALEVY RVSGLSMTAH
RLRQVAQNPL SDRSAGEHLP YTVVHLAIAP TQRQILHERI ARRFRLMLEQ GFVDEVELLW
RRGDLHASLP SMRAVGYRQV WEYLDGLLTR EQMVERGIIA TRQLAKRQFT WLRNWTDLHW
LDSLGDDNLQ RTLKYLETAA ILA