Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_07410 |
Symbol | serB |
ID | 7759693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 699196 |
End bp | 700410 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643803658 |
Product | Phosphoserine phosphatase |
Protein accession | YP_002797962 |
Protein GI | 226942889 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0560] Phosphoserine phosphatase |
TIGRFAM ID | [TIGR00338] phosphoserine phosphatase SerB [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.403165 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGCGCGAAA TTGTCCTGAT CAACCTCACC GGGCCGGATC GTCCCGGCCT GACCGCGTCC GTCACCGGCG CGCTGGCCCG CTGCGGGGCG GGCATCCTCG ACATCGGCCA GGCGGTCGTC CACGACACCC TGTCGTTCGG CATCCTGGTC GAGGTCCCGG CCGGGAGCGA ACTGTCGATC CTGCAGAAGG AACTGCTGTT CGTCGCCCAC GGGCTCGGGC AGCAGGTGCG TTTCACCTCC GTTTCCGAAG CCGAGTACGC GGCCTGGGTC GCCGACCAGG GCAAGCCGCG CTACATCGTC ACCCTGATGA CGCGCCGGGT GAGCGCCGCG CAACTGGAAC GGGTCAGTGC GATCACCGCC CGCCACGGCC TGGAAATCGA GCAGATCGAC CGTCTGTCCG GACGTCTGCC CCTGGACACG CCGGAGGCGC GCAGCAAGGG CTGCATCGAG TTCTCGGTGC GTGGCGAGCC GGCCGATCCG GCGGCGCTGC GCGCGGAATT CCTGTTGACG GCCCAGGAGC TCAACGTCGA CATCGGCTTC CAGCTCGACA CGCTGTTCCG GCGTATCCGC CGTCTGGCGG TGTTCGACAT GGATTCGACG CTGATCGAGG CGGAGGTGAT CGACGAGTTG GCCAAGGCTG CCGGCATCGG CGACAAGGTC GCGGCCATCA CCGAGCGGGC GATGCGCGGC GAGCTGGACT TCCGCGCCAG CTTCAAGGAG CGCCTGGCGC TGCTCAAGGG GTTGCCGGAG GAGGTGCTGG AGGAGATCGG CGCCTCGCTG CGCCTGACCG AGGGTGCCGA GGTGCTATTC GCCGAGCTCA GGCGCCTGGG CTACAAGACG GCGATCCTCT CCGGCGGTTT CTCCTACTTC GCCCGCCAGG TGCAGGCCAG GCTGGGCATC GACTACGTGT TCGCCAACGA ACTGGAAATC GTCGACGGCA AGGTCACCGG GGTGGCTGTC GAGCCGATCG TCGACGGTCA GCGCAAGGCC GACCTGCTGC GCCAACTGGC CGAGCGGGAG GGCCTGTCGC TGGAGCAGAC CATCGCCGTC GGCGACGGCG CCAACGACCT GCCGATGCTC GGCCTGGCCG GCCTCGGCGT GGCCTTCCGC GCCAAGCCGC TGGTCAGGCA GTCGGCCAGG CAGGCGATTT CCAACCTCGG CCTGGACGGC ATCCTCTACC TGCTCGGCTA TCGCGACCGC GACGGCATCC GTTAG
|
Protein sequence | MREIVLINLT GPDRPGLTAS VTGALARCGA GILDIGQAVV HDTLSFGILV EVPAGSELSI LQKELLFVAH GLGQQVRFTS VSEAEYAAWV ADQGKPRYIV TLMTRRVSAA QLERVSAITA RHGLEIEQID RLSGRLPLDT PEARSKGCIE FSVRGEPADP AALRAEFLLT AQELNVDIGF QLDTLFRRIR RLAVFDMDST LIEAEVIDEL AKAAGIGDKV AAITERAMRG ELDFRASFKE RLALLKGLPE EVLEEIGASL RLTEGAEVLF AELRRLGYKT AILSGGFSYF ARQVQARLGI DYVFANELEI VDGKVTGVAV EPIVDGQRKA DLLRQLAERE GLSLEQTIAV GDGANDLPML GLAGLGVAFR AKPLVRQSAR QAISNLGLDG ILYLLGYRDR DGIR
|
| |