Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_07050 |
Symbol | speA |
ID | 7759658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 668637 |
End bp | 670547 |
Gene Length | 1911 bp |
Protein Length | 636 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643803626 |
Product | arginine decarboxylase |
Protein accession | YP_002797930 |
Protein GI | 226942857 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1166] Arginine decarboxylase (spermidine biosynthesis) |
TIGRFAM ID | [TIGR01273] arginine decarboxylase, biosynthetic |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCGAC GTACACGCAA GGACGACGGC AGCCAGTGGA CCGTGGCCGA CAGCCGCGCC GTCTACGGCA TCCGTCACTG GGGTGCCGGT TATTTCGCGA TCAACGAGCG GGGCCACGTG GAGGCCCGGC CGAACCGCGC CGCCGACCGG CCGGTCGATC TCGTCGAACT GCTCGGCCAG TTGCGCGAGG CCGGCCTGTC GCTGCCGTTG CTGGTGCGTT TCCCGGACAT CCTGCAGGAC CGCGTGCGCC AGTTGACCAG TGCCTTCGAT GCGAACATCG CGCGCCTCGG CTACCAGAGC GGCTACACCG CGCTGTACCC GATCAAGGTT AACCAGCAGG AAGCGGTGGT GGAGAGCATC ATCGCCACGG CGAACGTCTC CATCGGCCTG GAGGCCGGCT CCAAGCCGGA GCTGCTCGCC GTGCTGGCGC TGGCGCCGAA AGGCGGCACC ATCGTCTGCA ACGGCTACAA GGACCGCGAA TTCATTCGCC TGGCGTTGAT CGGCCAGAAA CTCGGCCACT CGGTGTTCAT CGTCGTCGAG AAGGAATCGG AAGTGCAACT GATCATCGAG GAGGCGGCCG AACTCCGGGT CGTCCCGCAG CTCGGCCTGC GCGTGCGGCT GTCCTCGCTG ACTTCCTCGA AATGGGCCGA TACCGGCGGC GAGAAGGCCA AGTTCGGCCT CTCCGCGGCG CAACTGCTGC GCGTGGCCGA ACGCCTGCGC GACGCCGGGC TGGAGCAGGG GGTACGCCTC CTGCACTTCC ACATGGGCTC GCAGATCGCC AACCTGGCCG ATTACCAGGG CGGCTTCAAG GAAGCCATCC GCTACTACGC CGAACTGCGC GCCCTCGGCC TGCCCCTCGA CCACGTGGAC GTCGGCGGTG GCCTGGGCGT CGATTACGAC GGCACCCATT CGCGCAATCC CAGCTCGATC AACTACGACA TGGACGATTA CGCCGCCACC GTGGTCGGCA TGCTCCAGGA GTTCTGCGAT GCCCAGGGCC TGCCGCATCC GCACATTTTT TCGGAGAGCG GCCGCGCCCT GAGCGCGCAT CACGCGATGC TGGTGGTGCA GGTCACCGAC GTGGAGCGCC ACAACGACCA GTTGCCGGAG ATCAACGATC CGCAGCGTCT GCCGGAGACG CTGCGCTGGC TGATCGAACT GCTCGGCCCG ACCGATGACG AGATGGTCAC CGAGACCTAC TGGCGCGCCA CCCAGTACTT GGGCGAACTG TCGCGCATGT ATGCCGACGG CAAGCTGGGC CTGGCCGACA AGGCGCTCGC CGAGCAGTGC TACTACGCGC TCTGCCGGCG CCTGCACGAC TCGCTGAAGG CCCGCCAGCG CTCCCACCGC CAGGTGCTCG ACGAACTCAA CGACAAGCTG GCGGACAAGT ACATCTGCAA CTTCTCGGTG TTCCAGAGCC TGCCGGACAC CTGGGCGATC GGTCAGGTCC TGCCGATCCT GCCGCTCGAC CGGCTCGACG AGGAGCCGCT GCGCCGCGCG GTGCTGCAGG ACCTGACCTG CGACTCCGAC GGCAAGATCA AGCAGTACGT CGACGAGCAG AGCATCGAGA CCAGCCTGCC GGTGCATGAG CTGCGCGCGG GCGAGGAGTA CCTTTTGGGC ATCTTCCTGG TTGGTGCCTA TCAGGAGATC CTCGGCGACA TGCACAACCT GTTCGGCGAC ACCGACTCGG TGAACGTCTA CCAGCGCGCC GACGGCAGCA TCTACCACGC CGGCATCGAA ACCCACGACA CCATCGAGGA CATGCTGCGC TACGTGCACC TGTCGCCCGA GGAACTGATG ACCTACTACC GCGACAAGGT GGCCGGCGCG CCCATCAGCG CCCGCGAACG CGCCCAGTAC CTCGATGCCC TGCGCCTGGG GCTGACGCGC TCGTCCTACC TGTCGGGCTG A
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Protein sequence | MARRTRKDDG SQWTVADSRA VYGIRHWGAG YFAINERGHV EARPNRAADR PVDLVELLGQ LREAGLSLPL LVRFPDILQD RVRQLTSAFD ANIARLGYQS GYTALYPIKV NQQEAVVESI IATANVSIGL EAGSKPELLA VLALAPKGGT IVCNGYKDRE FIRLALIGQK LGHSVFIVVE KESEVQLIIE EAAELRVVPQ LGLRVRLSSL TSSKWADTGG EKAKFGLSAA QLLRVAERLR DAGLEQGVRL LHFHMGSQIA NLADYQGGFK EAIRYYAELR ALGLPLDHVD VGGGLGVDYD GTHSRNPSSI NYDMDDYAAT VVGMLQEFCD AQGLPHPHIF SESGRALSAH HAMLVVQVTD VERHNDQLPE INDPQRLPET LRWLIELLGP TDDEMVTETY WRATQYLGEL SRMYADGKLG LADKALAEQC YYALCRRLHD SLKARQRSHR QVLDELNDKL ADKYICNFSV FQSLPDTWAI GQVLPILPLD RLDEEPLRRA VLQDLTCDSD GKIKQYVDEQ SIETSLPVHE LRAGEEYLLG IFLVGAYQEI LGDMHNLFGD TDSVNVYQRA DGSIYHAGIE THDTIEDMLR YVHLSPEELM TYYRDKVAGA PISARERAQY LDALRLGLTR SSYLSG
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