Gene Avin_07000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_07000 
Symbol 
ID7759653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp665346 
End bp665879 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content72% 
IMG OID643803621 
ProductNUDIX hydrolase 
Protein accessionYP_002797925 
Protein GI226942852 
COG category[I] Lipid transport and metabolism 
COG ID[COG1443] Isopentenyldiphosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATACTT CCGCACGGGA GGCGGCCCAT CGGGCCGCCT CGGACGCCGA ACTGGTCGCC 
TGGGTCGACG CCGACGACCG CCCGCTCGGC GCGTTGCCCC GCGCCGAGCT GCGCGAGCGC
GGCCTGATCG GCCGTGGCAC TTTCATCCTG CTGTTCAACG GCGCCGGGCA GCTCTGCGTG
CACCGGCGCA CCCTCAGCAA GGCGATCTAT CCCGGCTACT GGGACGTCGC CGCCGGCGGC
ATGGTGCAGG CCGGGGAGGA CTATGGCGAG TCCGCCGTCC GCGAACTGGC CGAGGAACTC
GGCATCACCG GCGTGGCGCT GCGCGAGCAC GGCCGCTTCT TCTTCGACCA GCCGGACAAC
CGCCTGTGGT GCGCGGTGTT CTCGGCGGTC TCCGACGCCC CGCTGGTGCT GCAGCCCGAG
GAAGTGCTGG AGGCCCGCTT CGTCCCGCCC CAGGAGGCCC TGCGCGAGGC CTTCGAGCGT
CCCTATTGCC CGGATTCTCT GGAGGCGTTG CGCCGCTACC TCGGCATGCT CTGA
 
Protein sequence
MDTSAREAAH RAASDAELVA WVDADDRPLG ALPRAELRER GLIGRGTFIL LFNGAGQLCV 
HRRTLSKAIY PGYWDVAAGG MVQAGEDYGE SAVRELAEEL GITGVALREH GRFFFDQPDN
RLWCAVFSAV SDAPLVLQPE EVLEARFVPP QEALREAFER PYCPDSLEAL RRYLGML