Gene Avin_06700 details

Gene Information

• Locus tag: Avin_06700
• Symbol: nrdR
• ID: 7759624
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 638037
• End bp: 638501
• Gene Length: 465 bp
• Protein Length: 154 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 643803592
• Product: transcriptional regulator NrdR
• Protein accession: YP_002797896
• Protein GI: 226942823
• COG category: [K] Transcription
• COG ID: [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains
• TIGRFAM ID: [TIGR00244] transcriptional regulator NrdR

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCATTGTC CTTTCTGCAG TGCCCACGAC ACCAAGGTCA TCGATTCGCG GCTGGTCGCC 
GAGGGCGATC AGGTGCGCCG CCGTCGCGAG TGCCAGGCCT GCGGCGAACG CTTCACCACC 
TTCGAGACCG CCGAACTGGT CATGCCCCGG GTCATCAAGC AGGATGGCAG CCGCCAGCCG 
TTCGACGAGG ACAAGCTGCG CGCCGGCATG CAGCGGGCGC TGGAGAAGCG CCCGGTGAGC 
GTCGAGCGCC TGGAGGCGGC GATCGGCCGG ATCAAGCACG AACTGCGCGC CACTGGGGAA 
CGGGAGGTCA AGTCGCGGGT GCTCGGCGAA CTGGTGATGG CCGAGCTGCG CAAGCTCGAC 
GAAGTCGCCT ACATCCGTTT CGCCTCGGTC TACCGGCGCT TCCAGGACCT CAACGAGTTC 
CGCGAGGAGA TCGAGCGCCT GTCCCGCGAG CCGTCCAAGC CATGA 

 

Protein sequence

MHCPFCSAHD TKVIDSRLVA EGDQVRRRRE CQACGERFTT FETAELVMPR VIKQDGSRQP 
FDEDKLRAGM QRALEKRPVS VERLEAAIGR IKHELRATGE REVKSRVLGE LVMAELRKLD 
EVAYIRFASV YRRFQDLNEF REEIERLSRE PSKP