| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_06610 |
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| Symbol | oprG-1 |
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| ID | 7759615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 631022 |
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| End bp | 631702 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643803583 |
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| Product | OmpW family outer membrane porin |
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| Protein accession | YP_002797887 |
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| Protein GI | 226942814 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3047] Outer membrane protein W |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCCAAGT TCAAATCCCT TTTCGCCCTT TCCCTGATCG GCATGGCCCT GGCAGCCCCC
TACGCCACTG CACACGAGCG TGGCGATATC GTCCTGCGCG CCGGCGCCGT CGTCGTCGAC
CCGCACGAGG ACAGCGAGGA CATCCGCCTC GCCGGCGCCG GCAAGCTCCC CGGCACCAAG
GCCACCCTCG ACAGCGACGT GCAGCTCGGC CTGAACTACC TCTACATGCT CACCGACCAC
GTCGGCATCG AGTACCTGGC CGCCACGCCC TTCACCCACG AAGTGAAGGC CAAGGGCCTT
CCGGGCGACC TGAACGGCCG CCTGGGCGAC TTCAAGCAAC TGCCACCGAC CGTCAGCCTG
GTCTACTACC CCTTCTCGCC CCACGCCACC ATCCAGCCCT ACGTCGGGGT CGGCCTCAAC
TACACCTACA TCTTCGAGAC CAAGCTGGGC AAGGCGGCCG AAGGCAAGGG CTTCAGCGGC
CTGGACATGC AGGACTCCAT CGGCCTGGCC GCGCAGGTCG GGGTGGACTA CATGCTGACC
GACACCCTCA TGCTCAACGC CCAGGTGCGC TACATCGACA TCGAGAGCAA GGCCACTACC
TACCTGAACG ACAGCAAGGT CACCGTCGAC GTGGACGTCA ACCCCTGGGT CTACATGGTC
GCCCTGGGTT ACAAGTTCTG A
|
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| Protein sequence | MAKFKSLFAL SLIGMALAAP YATAHERGDI VLRAGAVVVD PHEDSEDIRL AGAGKLPGTK
ATLDSDVQLG LNYLYMLTDH VGIEYLAATP FTHEVKAKGL PGDLNGRLGD FKQLPPTVSL
VYYPFSPHAT IQPYVGVGLN YTYIFETKLG KAAEGKGFSG LDMQDSIGLA AQVGVDYMLT
DTLMLNAQVR YIDIESKATT YLNDSKVTVD VDVNPWVYMV ALGYKF
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