Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_06490 |
Symbol | rpsD |
ID | 7759603 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 618412 |
End bp | 619032 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643803571 |
Product | 30S ribosomal protein S4 |
Protein accession | YP_002797875 |
Protein GI | 226942802 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0522] Ribosomal protein S4 and related proteins |
TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACGTT ACATTGGTCC CAAATGCAAA CTGTCCCGCC GCGAAGGCAC TGACCTGTTC CTGAAGAGCG GCTCCCGTGC GCTCGAGTCC AAGTGCAACG TCGAGTCGGC TCCGGGCATC CATGGTCAGC GCCGCGGTCG CCTGTCCGAG TACGGCACCC AACTGCGTGA GAAGCAGAAG GTTCGTCGCA TCTATGGCGT GCTGGAGCGC CAGTTCAGCG GTTACTACAA GGAGGCCAGC CGTCGCAAGG GCTCCACTGG CGAGAACCTG CTGCAACTGC TGGAGTGCCG TCTGGACAAC GTCGTCTATC GCATGGGCTT CGGCGCTACC CGTGCCGAGT CCCGTCAGTT GATTTCGCAC AAGGCCATTA CCGTCAATGG CCAGACCGTG AACATCCCTT CCTATCAGGT CAAGGTTGGC GATGTCGTCG CTATCCGCGA AAAGGCCAAG AACCAGCTGC GTATCGCTCA GGCTCTCGAA CTTTGCGCGC AGCGTGGCCG CGTCGAGTGG GTTGAAGTGG ATACCGAGAA GAAGTCTGGC GTGTTCAAGA GCGTGCCGGC TCGCAGTGAC CTGTCTGCCG ACATCAACGA AAACCTGATT GTCGAGCTCT ACTCCAAGTA A
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Protein sequence | MARYIGPKCK LSRREGTDLF LKSGSRALES KCNVESAPGI HGQRRGRLSE YGTQLREKQK VRRIYGVLER QFSGYYKEAS RRKGSTGENL LQLLECRLDN VVYRMGFGAT RAESRQLISH KAITVNGQTV NIPSYQVKVG DVVAIREKAK NQLRIAQALE LCAQRGRVEW VEVDTEKKSG VFKSVPARSD LSADINENLI VELYSK
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