Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_06420 |
Symbol | rpsE |
ID | 7759596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 614894 |
End bp | 615394 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643803564 |
Product | 30S ribosomal protein S5 |
Protein accession | YP_002797868 |
Protein GI | 226942795 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0098] Ribosomal protein S5 |
TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0942299 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAATA ACGAGCAAAA GCGCGACGAG GGTTACATCG AAAAGCTGGT CCAAGTCAAT CGCGTTGCCA AGACCGTCAA GGGTGGTCGC ATCTTTACCT TTACCGCGCT GACGGTCGTT GGCGACGGCA AAGGGCGTGT CGGCTTCGGC CGCGGCAAGT CCCGCGAGGT CCCTGCTGCT ATCCAGAAGG CCATGGAGGC TGCTCGCCGC AACATGATCC AGGTCGATCT CAGCGGCACC ACTCTGCAGT ATCCGGTCAA GTCCGCCCAT GGCGCTTCCC GTGTTTACAT GCAGCCGGCC AGCGAGGGTA CCGGAATCAT CGCCGGTGGT GCCATGCGTG CCGTCCTCGA GGTCGCAGGC GTACAGAACG TTCTGGCCAA GTGCTACGGC TCGACCAATC CGGTAAACGT GGTTTATGCC ACTTTCAAAG GACTGAAGGA AATGCAGTCC CCGGAATCCG TAGCGGCCAA GCGTGGCAAG AGCGTCGAGG AGATTCTCTG A
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Protein sequence | MANNEQKRDE GYIEKLVQVN RVAKTVKGGR IFTFTALTVV GDGKGRVGFG RGKSREVPAA IQKAMEAARR NMIQVDLSGT TLQYPVKSAH GASRVYMQPA SEGTGIIAGG AMRAVLEVAG VQNVLAKCYG STNPVNVVYA TFKGLKEMQS PESVAAKRGK SVEEIL
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