Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_06240 |
Symbol | rpsJ |
ID | 7759578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 606807 |
End bp | 607118 |
Gene Length | 312 bp |
Protein Length | 103 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643803546 |
Product | 30S ribosomal protein S10 |
Protein accession | YP_002797850 |
Protein GI | 226942777 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0051] Ribosomal protein S10 |
TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00394017 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAACC AACAAATCCG TATTCGGTTG AAGGCTTTTG ACCATCGCCT GATTGATCAA TCTACCCAGG AAATCGTGGA AACCGCGAAA CGTACTGGTG CTCAGGTGCG TGGTCCGATT CCTCTGCCTA CCCGTAAAGA GCGGTATACC GTTCTGATTT CGCCGCACGT CAACAAGGAT GCGCGTGATC AGTACGAAAT TCGTACCCAC AAGCGTGTGC TGGATATTGT TCAGCCGACC GACAAGACCG TCGACGCGCT GATGAAGCTC GATCTGGCGG CTGGCGTGGA AGTGCAGATC AGCCTCGGCT AA
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Protein sequence | MQNQQIRIRL KAFDHRLIDQ STQEIVETAK RTGAQVRGPI PLPTRKERYT VLISPHVNKD ARDQYEIRTH KRVLDIVQPT DKTVDALMKL DLAAGVEVQI SLG
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