Gene Avin_06240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_06240 
SymbolrpsJ 
ID7759578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp606807 
End bp607118 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content53% 
IMG OID643803546 
Product30S ribosomal protein S10 
Protein accessionYP_002797850 
Protein GI226942777 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0051] Ribosomal protein S10 
TIGRFAM ID[TIGR01049] ribosomal protein S10, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00394017 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAACC AACAAATCCG TATTCGGTTG AAGGCTTTTG ACCATCGCCT GATTGATCAA 
TCTACCCAGG AAATCGTGGA AACCGCGAAA CGTACTGGTG CTCAGGTGCG TGGTCCGATT
CCTCTGCCTA CCCGTAAAGA GCGGTATACC GTTCTGATTT CGCCGCACGT CAACAAGGAT
GCGCGTGATC AGTACGAAAT TCGTACCCAC AAGCGTGTGC TGGATATTGT TCAGCCGACC
GACAAGACCG TCGACGCGCT GATGAAGCTC GATCTGGCGG CTGGCGTGGA AGTGCAGATC
AGCCTCGGCT AA
 
Protein sequence
MQNQQIRIRL KAFDHRLIDQ STQEIVETAK RTGAQVRGPI PLPTRKERYT VLISPHVNKD 
ARDQYEIRTH KRVLDIVQPT DKTVDALMKL DLAAGVEVQI SLG